ENSG00000087053


Homo sapiens

Features
Gene ID: ENSG00000087053
  
Biological name :MTMR2
  
Synonyms : MTMR2 / myotubularin related protein 2 / Q13614
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q21
Gene start: 95832882
Gene end: 95925315
  
Corresponding Affymetrix probe sets: 203211_s_at (Human Genome U133 Plus 2.0 Array)   203212_s_at (Human Genome U133 Plus 2.0 Array)   214649_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000396020
Ensembl peptide - ENSP00000345752
Ensembl peptide - ENSP00000376915
Ensembl peptide - ENSP00000386882
Ensembl peptide - ENSP00000343737
NCBI entrez gene - 8898     See in Manteia.
OMIM - 603557
RefSeq - XM_017018518
RefSeq - XM_005274375
RefSeq - XM_006718934
RefSeq - XM_006718935
RefSeq - XM_006718936
RefSeq - XM_011543058
RefSeq - XM_011543059
RefSeq - XM_017018517
RefSeq - NM_001243571
RefSeq - NM_016156
RefSeq - NM_201278
RefSeq - NM_201281
RefSeq - XM_005274374
RefSeq Peptide - NP_958438
RefSeq Peptide - NP_001230500
RefSeq Peptide - NP_057240
RefSeq Peptide - NP_958435
swissprot - Q13614
swissprot - C9JEX3
swissprot - A0A024R3B7
Ensembl - ENSG00000087053
  
Related genetic diseases (OMIM): 601382 - Charcot-Marie-Tooth disease, type 4B1, 601382
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mtmr2ENSDARG00000004616Danio rerio
 MTMR2ENSGALG00000017200Gallus gallus
 Mtmr2ENSMUSG00000031918Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MTMR1 / Q13613 / myotubularin related protein 1ENSG0000006360169
MTM1 / Q13496 / myotubularin 1ENSG0000017110060
MTMR3 / Q13615 / myotubularin related protein 3ENSG0000010033035
MTMR6 / Q9Y217 / myotubularin related protein 6ENSG0000013950534
MTMR4 / Q9NYA4 / myotubularin related protein 4ENSG0000010838933
MTMR8 / Q96EF0 / myotubularin related protein 8ENSG0000010204333
MTMR7 / Q9Y216 / myotubularin related protein 7ENSG0000000398733
SBF1 / O95248 / SET binding factor 1ENSG0000010024131
MTMR9 / Q96QG7 / myotubularin related protein 9ENSG0000010464330
SBF2 / Q86WG5 / SET binding factor 2ENSG0000013381230


Protein motifs (from Interpro)
Interpro ID Name
 IPR000387  Tyrosine specific protein phosphatases domain
 IPR003595  Protein-tyrosine phosphatase, catalytic
 IPR004182  GRAM domain
 IPR010569  Myotubularin-like phosphatase domain
 IPR011993  PH-like domain superfamily
 IPR016130  Protein-tyrosine phosphatase, active site
 IPR029021  Protein-tyrosine phosphatase-like
 IPR030564  Myotubularin family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002091 negative regulation of receptor internalization ISS
 biological_processGO:0006470 protein dephosphorylation NAS
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006661 phosphatidylinositol biosynthetic process TAS
 biological_processGO:0016311 dephosphorylation IEA
 biological_processGO:0031642 negative regulation of myelination IEA
 biological_processGO:0032288 myelin assembly IEA
 biological_processGO:0035335 peptidyl-tyrosine dephosphorylation IEA
 biological_processGO:0045806 negative regulation of endocytosis ISS
 biological_processGO:0046488 phosphatidylinositol metabolic process IEA
 biological_processGO:0046855 inositol phosphate dephosphorylation IEA
 biological_processGO:0046856 phosphatidylinositol dephosphorylation IDA
 biological_processGO:0048666 neuron development IEA
 biological_processGO:0051262 protein tetramerization IEA
 biological_processGO:0060304 regulation of phosphatidylinositol dephosphorylation IDA
 biological_processGO:0090394 negative regulation of excitatory postsynaptic potential ISS
 biological_processGO:0097062 dendritic spine maintenance ISS
 biological_processGO:2000643 positive regulation of early endosome to late endosome transport ISS
 biological_processGO:2000645 negative regulation of receptor catabolic process ISS
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005774 vacuolar membrane IEA
 cellular_componentGO:0005829 cytosol ISS
 cellular_componentGO:0008021 synaptic vesicle ISS
 cellular_componentGO:0014069 postsynaptic density ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030424 axon ISS
 cellular_componentGO:0030425 dendrite ISS
 cellular_componentGO:0031901 early endosome membrane IEA
 cellular_componentGO:0043197 dendritic spine ISS
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0097060 synaptic membrane ISS
 molecular_functionGO:0004438 phosphatidylinositol-3-phosphatase activity IEA
 molecular_functionGO:0004725 protein tyrosine phosphatase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008138 protein tyrosine/serine/threonine phosphatase activity NAS
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016791 phosphatase activity IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0052629 phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity IDA
 molecular_functionGO:0052866 phosphatidylinositol phosphate phosphatase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of PIPs at the ER membrane
Synthesis of PIPs at the plasma membrane
Synthesis of PIPs at the early endosome membrane
Synthesis of PIPs at the late endosome membrane


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001270 Motor retardation 
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 HP:0001425 Heterogeneous 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002936 Distal sensory impairment 
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 HP:0003431 Decreased motor nerve conduction velocity (NCV) 
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 HP:0003693 Distal amyotrophy "Muscular atrophy affecting muscles in the distal portions of the extremities." [HPO:curators]
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0006958 Abnormal auditory evoked potentials "An abnormality of the auditory evoked potentials, which are used to trace the signal generated by a sound, from the cochlear nerve, through the lateral lemniscus, to the medial geniculate nucleus, and to the cortex." [HPO:curators]
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 HP:0007208 Irregular loops and focal folding of myelin sheaths 
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 HP:0010628 Facial muscle weakness "A weakness of any or all of the muscles of the face of any etiology." [HPO:curators]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000150712 MTMR12 / Q9C0I1 / myotubularin related protein 12  / reaction / complex
 ENSG00000133812 SBF2 / Q86WG5 / SET binding factor 2  / complex / reaction
 ENSG00000087053 MTMR2 / Q13614 / myotubularin related protein 2  / complex / reaction
 ENSG00000166912 MTMR10 / Q9NXD2 / myotubularin related protein 10  / reaction / complex
 ENSG00000100241 SBF1 / O95248 / SET binding factor 1  / reaction / complex






 

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