ENSG00000162733


Homo sapiens

Features
Gene ID: ENSG00000162733
  
Biological name :DDR2
  
Synonyms : DDR2 / discoidin domain receptor tyrosine kinase 2 / Q16832
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q23.3
Gene start: 162631373
Gene end: 162787400
  
Corresponding Affymetrix probe sets: 205168_at (Human Genome U133 Plus 2.0 Array)   225442_at (Human Genome U133 Plus 2.0 Array)   227561_at (Human Genome U133 Plus 2.0 Array)   235631_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000400309
Ensembl peptide - ENSP00000396864
Ensembl peptide - ENSP00000417030
Ensembl peptide - ENSP00000356898
Ensembl peptide - ENSP00000356899
Ensembl peptide - ENSP00000391310
NCBI entrez gene - 4921     See in Manteia.
OMIM - 191311
RefSeq - XM_011509588
RefSeq - NM_001014796
RefSeq - NM_006182
RefSeq - XM_006711344
RefSeq - XM_011509586
RefSeq - XM_011509587
RefSeq Peptide - NP_001341912
RefSeq Peptide - NP_006173
RefSeq Peptide - NP_001014796
RefSeq Peptide - NP_001341911
swissprot - Q5T244
swissprot - H0Y570
swissprot - Q5T245
swissprot - A0A024R906
swissprot - Q16832
swissprot - Q5T241
Ensembl - ENSG00000162733
  
Related genetic diseases (OMIM): 271665 - Spondylometaepiphyseal dysplasia, short limb-hand type, 271665
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddr2aENSDARG00000100693Danio rerio
 ddr2bENSDARG00000058695Danio rerio
 DDR2ENSGALG00000039322Gallus gallus
 Ddr2ENSMUSG00000026674Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DDR1 / Q08345 / discoidin domain receptor tyrosine kinase 1ENSG0000020458056
NTRK2 / Q16620 / neurotrophic receptor tyrosine kinase 2ENSG0000014805324
NTRK1 / P04629 / neurotrophic receptor tyrosine kinase 1ENSG0000019840023
INSR / P06213 / insulin receptorENSG0000017110523
NTRK3 / Q16288 / neurotrophic receptor tyrosine kinase 3ENSG0000014053823
MUSK / O15146 / muscle associated receptor tyrosine kinaseENSG0000003030422
ROS1 / P08922 / ROS proto-oncogene 1, receptor tyrosine kinaseENSG0000004793622
IGF1R / P08069 / insulin like growth factor 1 receptorENSG0000014044322
INSRR / P14616 / insulin receptor related receptorENSG0000002764422
ROR1 / Q01973 / receptor tyrosine kinase like orphan receptor 1ENSG0000018548318
ROR2 / Q01974 / receptor tyrosine kinase like orphan receptor 2ENSG0000016907118
ALK / Q9UM73 / ALK receptor tyrosine kinaseENSG0000017109418
PTK7 / Q13308 / protein tyrosine kinase 7 (inactive)ENSG0000011265516
LTK / P29376 / leukocyte receptor tyrosine kinaseENSG0000006252415


Protein motifs (from Interpro)
Interpro ID Name
 IPR000421  Coagulation factor 5/8 C-terminal domain
 IPR000719  Protein kinase domain
 IPR001245  Serine-threonine/tyrosine-protein kinase, catalytic domain
 IPR002011  Tyrosine-protein kinase, receptor class II, conserved site
 IPR008266  Tyrosine-protein kinase, active site
 IPR008979  Galactose-binding-like domain superfamily
 IPR011009  Protein kinase-like domain superfamily
 IPR020635  Tyrosine-protein kinase, catalytic domain
 IPR034299  Discoidin domain-containing receptor 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001503 ossification IEA
 biological_processGO:0003416 endochondral bone growth ISS
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0007155 cell adhesion TAS
 biological_processGO:0007165 signal transduction TAS
 biological_processGO:0007169 transmembrane receptor protein tyrosine kinase signaling pathway IEA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0010715 regulation of extracellular matrix disassembly TAS
 biological_processGO:0010763 positive regulation of fibroblast migration TAS
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0018108 peptidyl-tyrosine phosphorylation IDA
 biological_processGO:0030198 extracellular matrix organization TAS
 biological_processGO:0030199 collagen fibril organization ISS
 biological_processGO:0030500 regulation of bone mineralization IMP
 biological_processGO:0031214 biomineral tissue development ISS
 biological_processGO:0035988 chondrocyte proliferation TAS
 biological_processGO:0038063 collagen-activated tyrosine kinase receptor signaling pathway IEA
 biological_processGO:0045669 positive regulation of osteoblast differentiation IMP
 biological_processGO:0045860 positive regulation of protein kinase activity IMP
 biological_processGO:0046777 protein autophosphorylation IDA
 biological_processGO:0048146 positive regulation of fibroblast proliferation ISS
 biological_processGO:0051091 positive regulation of DNA-binding transcription factor activity IMP
 biological_processGO:0090091 positive regulation of extracellular matrix disassembly ISS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IEA
 cellular_componentGO:0005925 focal adhesion HDA
 cellular_componentGO:0015629 actin cytoskeleton IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004713 protein tyrosine kinase activity IEA
 molecular_functionGO:0004714 transmembrane receptor protein tyrosine kinase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005518 collagen binding IDA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0038062 protein tyrosine kinase collagen receptor activity IEA


Pathways (from Reactome)
Pathway description
Non-integrin membrane-ECM interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000464 Abnormality of the neck 
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 HP:0000520 Proptosis 
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 HP:0000767 Pectus excavatum "A defect of the chest wall characterized by a depression of the sternum, giving the chest ("pectus") a caved-in ("excavatum") appearance." [HPO:curators]
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 HP:0000773 Short ribs 
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 HP:0000907 Anterior rib cupping 
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 HP:0000922 Posterior rib cupping 
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 HP:0000926 Platyspondyly 
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 HP:0001230 Broad metacarpals 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001591 Bell-shaped chest 
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 HP:0001840 Metatarsus varus "Metatarsus varus (adductus) is one of the most common foot deformities, that is defined as a transverse plane deformity in Lisfranc s (tarsometatarsal) joints in which the metatarsals are deviated medially. The relationship between talus and calcaneus is normal. On inspection the toes angle abruptly towards the midline, creating a C-shaped lateral foot border with a prominent styloid process of the 5th metatarsal. The result is that the forefoot is twisted inwards relative to the heel, so that the sole faces the midline." [HPO:curators]
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002091 Restrictive lung disease 
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 HP:0002176 Spinal cord compression 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002651 Spondyloepimetaphyseal dysplasia 
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 HP:0002787 Tracheal calcifications "Calcification (abnormal deposits of calcium) in the tracheal tissues." [HPO:curators]
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 HP:0002869 Flared iliac wings 
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 HP:0002979 Bowing of the legs 
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 HP:0002983 Micromelia 
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 HP:0002987 Elbow contractures 
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 HP:0003015 Metaphyseal flaring "The presence of splayed (i.e.,flared) metaphyseal segments of the long bones." [HPO:curators]
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 HP:0003026 Short long bones 
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 HP:0003085 Disproportionately long fibulae 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003311 Hypoplastic odontoid process 
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 HP:0003320 C1-C2 subluxation "A partial dislocation of the intervertebral joint between the first and second cervical vertebrae." [HPO:curators]
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 HP:0003396 Syringomyelia 
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 HP:0003467 Atlantoaxial instability 
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 HP:0005257 Thoracic hypoplasia 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005462 Calcification of falx cerebri 
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 HP:0006009 Widened phalanges 
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 HP:0006380 Knee flexion deformities 
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 HP:0006532 Pneumonia, recurrent episodes 
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 HP:0006600 Progressive calcification of costochondral cartilage 
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 HP:0008873 Short stature, disproportionate short-limbed "A type of short stature characterized by a short limbs but an average-sized trunk." [HPO:curators]
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 HP:0009164 Abnormal calcification of the carpal bones 
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 HP:0009803 Hypoplastic/small phalanges of the hand 
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 HP:0009875 Triangular shaped distal phalanges of the hand 
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 HP:0010049 Hypoplastic/short metacarpal bones 
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 HP:0010655 Stippling of the epiphyses "The presence of abnormal punctate (speckled, dot-like) calcifications in the epiphyses (FMA:24012)." [HPO:curators]
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 HP:0011800 Midface retrusion "Posterior positions and/or vertical shortening of the infraorbital and perialar regions, or increased concavity of the face and/or reduced nasolabial angle." [DDD:jclayton-smith]
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 HP:0030043 Hip Subluxation "A partial dislocation of the hip joint, whereby the head of the femur is partially displaced from the socket." []
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000162733 DDR2 / Q16832 / discoidin domain receptor tyrosine kinase 2  / complex






 

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