ENSG00000165458


Homo sapiens

Features
Gene ID: ENSG00000165458
  
Biological name :INPPL1
  
Synonyms : inositol polyphosphate phosphatase like 1 / INPPL1 / O15357
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q13.4
Gene start: 72223701
Gene end: 72239105
  
Corresponding Affymetrix probe sets: 201598_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000444630
Ensembl peptide - ENSP00000444619
Ensembl peptide - ENSP00000446360
Ensembl peptide - ENSP00000298229
Ensembl peptide - ENSP00000321775
Ensembl peptide - ENSP00000437852
Ensembl peptide - ENSP00000440018
Ensembl peptide - ENSP00000440512
Ensembl peptide - ENSP00000440904
Ensembl peptide - ENSP00000441094
NCBI entrez gene - 3636     See in Manteia.
OMIM - 600829
RefSeq - XM_017017673
RefSeq - NM_001567
RefSeq - XM_005273978
RefSeq - XM_005273979
RefSeq - XM_011544999
RefSeq - XM_011545000
RefSeq Peptide - NP_001558
swissprot - H7BXR2
swissprot - A0A0A0MTP6
swissprot - O15357
swissprot - F5GWY9
swissprot - F5GY16
swissprot - F5GYK9
swissprot - F5H588
swissprot - H0YFZ4
swissprot - H0YFB4
Ensembl - ENSG00000165458
  
Related genetic diseases (OMIM): 258480 - Opsismodysplasia, 258480
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 inppl1aENSDARG00000104222Danio rerio
 INPPL1ENSGALG00000004336Gallus gallus
 Inppl1ENSMUSG00000032737Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
INPP5D / Q92835 / inositol polyphosphate-5-phosphatase DENSG0000016891838
SYNJ2 / O15056 / synaptojanin 2ENSG0000007826915
SYNJ1 / O43426 / synaptojanin 1ENSG0000015908215
INPP5B / P32019 / inositol polyphosphate-5-phosphatase BENSG0000020408413
OCRL / Q01968 / OCRL, inositol polyphosphate-5-phosphataseENSG0000012212612
INPP5J / Q15735 / inositol polyphosphate-5-phosphatase JENSG0000018513310
INPP5E / Q9NRR6 / inositol polyphosphate-5-phosphatase EENSG0000014838410
INPP5K / Q9BT40 / inositol polyphosphate-5-phosphatase KENSG000001323768
Q96GF1 / RNF185 / ring finger protein 185ENSG000001389423


Protein motifs (from Interpro)
Interpro ID Name
 IPR000300  Inositol polyphosphate-related phosphatase
 IPR000980  SH2 domain
 IPR001660  Sterile alpha motif domain
 IPR005135  Endonuclease/exonuclease/phosphatase
 IPR013761  Sterile alpha motif/pointed domain superfamily
 IPR036691  Endonuclease/exonuclease/phosphatase superfamily
 IPR036860  SH2 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001958 endochondral ossification IMP
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0006006 glucose metabolic process IEA
 biological_processGO:0006661 phosphatidylinositol biosynthetic process TAS
 biological_processGO:0006897 endocytosis IMP
 biological_processGO:0007015 actin filament organization IMP
 biological_processGO:0007155 cell adhesion TAS
 biological_processGO:0008285 negative regulation of cell proliferation IEA
 biological_processGO:0009791 post-embryonic development IEA
 biological_processGO:0010629 negative regulation of gene expression IEA
 biological_processGO:0019221 cytokine-mediated signaling pathway TAS
 biological_processGO:0032868 response to insulin IEA
 biological_processGO:0043647 inositol phosphate metabolic process TAS
 biological_processGO:0044255 cellular lipid metabolic process IEA
 biological_processGO:0046856 phosphatidylinositol dephosphorylation IEA
 biological_processGO:0097178 ruffle assembly IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030027 lamellipodium IEA
 cellular_componentGO:0030175 filopodium IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0003779 actin binding IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0017124 SH3 domain binding IEA
 molecular_functionGO:0034485 phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity TAS
 molecular_functionGO:0042169 SH2 domain binding IPI
 molecular_functionGO:0052659 inositol-1,3,4,5-tetrakisphosphate 5-phosphatase activity TAS


Pathways (from Reactome)
Pathway description
Synthesis of PIPs at the plasma membrane
Synthesis of IP3 and IP4 in the cytosol
Interleukin receptor SHC signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000117 Decreased renal tubular phosphate reabsorption 
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000239 Large fontanelles "In newborns, the two frontal bones, two parietal bones, and one occipital bone are joined by fibrous sutures, which form a small posterior fontanelle, and a larger, diamond-shaped anterior fontanelle. These regions allow for the skull to pass the birth canal and for later growth. The fontanelles gradually ossify, whereby the posterior fontanelle usually closes by eight weeks and the anterior fontanelle by the 9th to 16th month of age. Large fontanelles are diagnosed if the fontanelles are larger than age-dependent norms." [HPO:curators]
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000268 Dolichocephaly 
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000343 Long philtrum 
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000470 Short neck 
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 HP:0000592 Blue sclerae 
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 HP:0000767 Pectus excavatum "A defect of the chest wall characterized by a depression of the sternum, giving the chest ("pectus") a caved-in ("excavatum") appearance." [HPO:curators]
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 HP:0000773 Short ribs 
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 HP:0000774 Narrow chest 
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 HP:0000882 Hypoplastic scapulae 
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 HP:0000895 Hooked clavicles 
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 HP:0000907 Anterior rib cupping 
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 HP:0000922 Posterior rib cupping 
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 HP:0000944 Abnormality of the metaphyses 
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 HP:0000946 Hypoplastic ilia 
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 HP:0000947 Dumbbell-shaped long bones 
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 HP:0000969 Edema "An abnormal accumulation of fluid beneath the skin, or in one or more cavities of the body. Edema may be related to one or more of the following factors: 1) increased capillary hydrostatic pressure, 2) decreased osmotic pressure of plasma, 3) decreased tissue tension and lymphatic drainage, 4) increased osmotic pressure of tissue fluids, and 5) increased capillary permeability." [HPO:curators]
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 HP:0001004 Lymphedema 
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 HP:0001156 Brachydactyly 
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 HP:0001182 Tapered fingers 
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 HP:0001231 Abnormality of the fingernails "An abnormality of the `fingernails` (FMA:54327)." [HPO:probinson]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
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 HP:0001538 Protuberant abdomen "A thrusting or bulging out of the abdomen." [HPO:curators]
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 HP:0001561 Polyhydramnios 
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 HP:0001591 Bell-shaped chest 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001773 Short, broad feet "Abnormally short and wide feet." [HPO:curators]
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 HP:0001800 Hypoplastic toenails "Underdeveloped toenails." [HPO:curators]
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002093 Respiratory insufficiency 
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 HP:0002148 Hypophosphatemia "A lower than normal level of blood phosphate." [HPO:curators]
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002983 Micromelia 
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 HP:0003021 Metaphyseal cupping "Metaphyseal cupping refers to an inward bulging of the metaphyseal profile giving the metaphysis a cup-like appearance." [HPO:curators]
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 HP:0003026 Short long bones 
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 HP:0003038 Fibular hypoplasia "Underdevelopment of the fibula." [HPO:curators]
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 HP:0003173 Hypoplastic pubic bones 
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 HP:0003175 Hypoplastic ischia 
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 HP:0003177 Square iliac bones 
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 HP:0003180 Flat acetabular roofs 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003510 Short stature, severe "A severe degree of short stature." [HPO:curators]
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 HP:0004279 Hypoplastic hand 
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 HP:0004565 severe platyspondyly 
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 HP:0005019 Diaphyseal thickening 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005469 Occipital plagiocephaly "Occipital plagiocephaly can result from fusion or sclerosis of the lambdoid suture. If unilateral, this is accompanied by unilateral occipital flattening and bulging of the ispilateral frontal bone." [HPO:curators]
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 HP:0005616 Accelerated skeletal maturation "An abnormally increased rate of skeletal maturation. Accelerated skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0005930 Abnormality of the epiphyses 
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 HP:0008108 Advanced tarsal ossification 
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 HP:0008479 Hypoplastic vertebral bodies 
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 HP:0008873 Short stature, disproportionate short-limbed "A type of short stature characterized by a short limbs but an average-sized trunk." [HPO:curators]
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 HP:0008905 Rhizomelic short stature 
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 HP:0011304 Broad thumb "Increased thumb width without increased dorso-ventral dimension." [pmid:19125433]
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 HP:0012107 Increased fibular diameter "Increased width of the cross sectional diameter of the fibula." [HPO:probinson, MP:0008159]
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 HP:0100569 Abnormality of ossification/mineralisation of vertebrae 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000160691 SHC1 / P29353 / SHC adaptor protein 1  / complex / reaction
 ENSG00000198223 CSF2RA / P15509 / colony stimulating factor 2 receptor alpha subunit  / reaction / complex
 ENSG00000165458 INPPL1 / O15357 / inositol polyphosphate phosphatase like 1  / complex / reaction
 ENSG00000185291 IL3RA / P26951 / interleukin 3 receptor subunit alpha  / reaction / complex
 ENSG00000164400 CSF2 / P04141 / colony stimulating factor 2  / reaction / complex
 ENSG00000113525 IL5 / P05113 / interleukin 5  / reaction / complex
 ENSG00000168918 INPP5D / Q92835 / inositol polyphosphate-5-phosphatase D  / reaction / complex
 ENSG00000096968 JAK2 / O60674 / Janus kinase 2  / reaction / complex
 ENSG00000091181 IL5RA / Q01344 / interleukin 5 receptor subunit alpha  / complex / reaction
 ENSG00000164399 IL3 / P08700 / interleukin 3  / reaction / complex
 ENSG00000100368 CSF2RB / P32927 / colony stimulating factor 2 receptor beta common subunit  / reaction / complex






 

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