ENSMUSG00000051490


Mus musculus

Features
Gene ID: ENSMUSG00000051490
  
Biological name :Foxd4
  
Synonyms : Forkhead box protein D4 / Foxd4 / Q60688
  
Possible biological names infered from orthology : forkhead box D4 / forkhead box D4 like 1 / forkhead box D4 like 3 / forkhead box D4 like 4 / forkhead box D4 like 5 / forkhead box D4 like 6 / FOXD4L1 / FOXD4L3 / FOXD4L4 / FOXD4L5 / FOXD4L6 / Q12950 / Q3SYB3 / Q5VV16 / Q6VB84 / Q8WXT5 / Q9NU39
  
Species: Mus musculus
  
Chr. number: 19
Strand: -1
Band: B
Gene start: 24898965
Gene end: 24901309
  
Corresponding Affymetrix probe sets: 10466814 (MoGene1.0st)   1422318_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000058575
NCBI entrez gene - 14237     See in Manteia.
MGI - MGI:1347467
RefSeq - NM_008022
RefSeq Peptide - NP_032048
swissprot - Q60688
Ensembl - ENSMUSG00000051490
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 foxd3ENSDARG00000021032Danio rerio
 FOXD4ENSG00000170122Homo sapiens
 Q3SYB3ENSG00000273514Homo sapiens
 Q5VV16ENSG00000204779Homo sapiens
 Q6VB84ENSG00000187559Homo sapiens
 Q8WXT5ENSG00000184659Homo sapiens
 Q9NU39ENSG00000184492Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Foxd2 / O35392 / Forkhead box protein D2 / O60548* / forkhead box D2*ENSMUSG0000005521033
Foxd3 / forkhead box D3 / Q9UJU5*ENSMUSG0000006726132
Foxd1 / Q61345 / Forkhead box protein D1 / Q16676* / forkhead box D1*ENSMUSG0000007830230
Foxe1 / Q8R2I0 / Forkhead box protein E1 / O00358* / forkhead box E1*ENSMUSG0000007099024
Foxe3 / Q9QY14 / Forkhead box protein E3 / Q13461* / forkhead box E3*ENSMUSG0000004451823
Foxq1 / O70220 / Forkhead box protein Q1 / Q9C009* / forkhead box Q1*ENSMUSG0000003841521
Foxg1 / Q60987 / Forkhead box protein G1 / P55316* / forkhead box G1*ENSMUSG0000002095021
Foxf2 / O54743 / Forkhead box protein F2 / Q12947* / forkhead box F2*ENSMUSG0000003840220
Foxf1 / Q61080 / Forkhead box protein F1 / Q12946* / forkhead box F1*ENSMUSG0000004281219
Gm5294 / AC187653.1*ENSMUSG0000009450418
Foxh1 / O88621 / Forkhead box protein H1 / O75593* / forkhead box H1*ENSMUSG0000003383715
Foxp1 / P58462 / Mus musculus forkhead box P1 (Foxp1), transcript variant 4, mRNA.ENSMUSG0000003006714
Foxp4 / Q9DBY0 / Forkhead box protein P4 / Q8IVH2* / forkhead box P4*ENSMUSG0000002399112
Foxp2 / P58463 / Forkhead box protein P2 / O15409* / forkhead box P2*ENSMUSG0000002956312
Gm43517ENSMUSG0000008992211
Foxp3 / Q99JB6 / Forkhead box protein P3 Forkhead box protein P3, C-terminally processed Forkhead box protein P3 41 kDa form / Q9BZS1* / forkhead box P3*ENSMUSG000000395219


Protein motifs (from Interpro)
Interpro ID Name
 IPR001766  Fork head domain
 IPR018122  Fork head domain conserved site1
 IPR030456  Fork head domain conserved site 2
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0009653 anatomical structure morphogenesis IBA
 biological_processGO:0030154 cell differentiation IBA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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