ENSMUSG00000055210


Mus musculus

Features
Gene ID: ENSMUSG00000055210
  
Biological name :Foxd2
  
Synonyms : Forkhead box protein D2 / Foxd2 / O35392
  
Possible biological names infered from orthology : forkhead box D2 / O60548
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D1
Gene start: 114906282
Gene end: 114908873
  
Corresponding Affymetrix probe sets: 10515159 (MoGene1.0st)   1442315_at (Mouse Genome 430 2.0 Array)   1450289_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000066868
NCBI entrez gene - 17301     See in Manteia.
MGI - MGI:1347471
RefSeq - NM_008593
RefSeq Peptide - NP_032619
swissprot - O35392
Ensembl - ENSMUSG00000055210
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 foxd1ENSDARG00000029179Danio rerio
 foxd2ENSDARG00000058133Danio rerio
 foxd5ENSDARG00000042485Danio rerio
 zgc:162612ENSDARG00000079699Danio rerio
 FOXD2ENSG00000186564Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Foxd1 / Q61345 / Forkhead box protein D1 / Q16676* / forkhead box D1*ENSMUSG0000007830241
Foxd3 / forkhead box D3 / Q9UJU5*ENSMUSG0000006726135
Foxd4 / Q60688 / Forkhead box protein D4 / Q9NU39* / Q12950* / Q3SYB3* / Q5VV16* / Q6VB84* / Q8WXT5* / FOXD4L3* / FOXD4L4* / FOXD4L5* / FOXD4L6* / FOXD4L1* / forkhead box D4* / forkhead bo...ENSMUSG0000005149029
Foxe1 / Q8R2I0 / Forkhead box protein E1 / O00358* / forkhead box E1*ENSMUSG0000007099025
Foxg1 / Q60987 / Forkhead box protein G1 / P55316* / forkhead box G1*ENSMUSG0000002095024
Foxf2 / O54743 / Forkhead box protein F2 / Q12947* / forkhead box F2*ENSMUSG0000003840223
Foxe3 / Q9QY14 / Forkhead box protein E3 / Q13461* / forkhead box E3*ENSMUSG0000004451822
Foxq1 / O70220 / Forkhead box protein Q1 / Q9C009* / forkhead box Q1*ENSMUSG0000003841521
Foxf1 / Q61080 / Forkhead box protein F1 / Q12946* / forkhead box F1*ENSMUSG0000004281219
Gm5294 / AC187653.1*ENSMUSG0000009450418
Foxp4 / Q9DBY0 / Forkhead box protein P4 / Q8IVH2* / forkhead box P4*ENSMUSG0000002399116
Foxp2 / P58463 / Forkhead box protein P2 / O15409* / forkhead box P2*ENSMUSG0000002956316
Foxp1 / P58462 / Mus musculus forkhead box P1 (Foxp1), transcript variant 4, mRNA.ENSMUSG0000003006716
Foxh1 / O88621 / Forkhead box protein H1 / O75593* / forkhead box H1*ENSMUSG0000003383716
Gm43517ENSMUSG0000008992212
Foxp3 / Q99JB6 / Forkhead box protein P3 Forkhead box protein P3, C-terminally processed Forkhead box protein P3 41 kDa form / Q9BZS1* / forkhead box P3*ENSMUSG0000003952110


Protein motifs (from Interpro)
Interpro ID Name
 IPR001766  Fork head domain
 IPR018122  Fork head domain conserved site1
 IPR030456  Fork head domain conserved site 2
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0009653 anatomical structure morphogenesis IBA
 biological_processGO:0030154 cell differentiation IBA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0043565 sequence-specific DNA binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000519 hydronephrosis "dilation of the pelvis and calices of one or both kidneys" [J:56641]
Show

Allelic Composition: Pax3Sp-1H/Pax3Sp-1H
Genetic Background: involves: 101/H * C3H/HeH * C57BL/6

Allelic Composition: Foxd2tm1Blh/Foxd2tm1Blh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0000536 hydroureter "distention of the ureter with urine, due to blockage from any cause" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:Cml, J:13044]
Show

Allelic Composition: Pax3Sp-1H/Pax3Sp-1H
Genetic Background: involves: 101/H * C3H/HeH * C57BL/6

Allelic Composition: Foxd2tm1Blh/Foxd2tm1Blh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0002989 small kidney "reduced physical bulk one or both of the organs responsible for urine secretion" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Pax3Sp-1H/Pax3Sp-1H
Genetic Background: involves: 101/H * C3H/HeH * C57BL/6

Allelic Composition: Foxd2tm1Blh/Foxd2tm1Blh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

 MP:0002990 short ureter "reduced length of the tube that conducts the urine from the renal pelvis to the bladder" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Pax3Sp-1H/Pax3Sp-1H
Genetic Background: involves: 101/H * C3H/HeH * C57BL/6

Allelic Composition: Foxd2tm1Blh/Foxd2tm1Blh
Genetic Background: involves: 129S6/SvEvTac * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr