ENSDARG00000003146


Danio rerio

Features
Gene ID: ENSDARG00000003146
  
Biological name :si:dkey-27m7.4
  
Synonyms : si:dkey-27m7.4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 13
Strand: 1
Band:
Gene start: 17702522
Gene end: 17708031
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000057912
Ensembl peptide - ENSDARP00000118179
swissprot - B8A534
swissprot - F1Q5R6
ZFIN ID - ZDB-GENE-090313-297
Ensembl - ENSDARG00000003146
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
nefma / neurofilament, medium polypeptide a / NEFM* / P07197* / neurofilament medium*ENSDARG0000002135141
inaa / internexin neuronal intermediate filament protein, alpha a / INA* / Q16352* / P46660* / internexin neuronal intermediate filament protein alpha*ENSDARG0000001186240
zgc:65851ENSDARG0000001228139
inab / internexin neuronal intermediate filament protein, alpha b / INA* / Q16352* / P46660* / internexin neuronal intermediate filament protein alpha*ENSDARG0000005324839
nefmb / neurofilament, medium polypeptide b / NEFM* / P07197* / neurofilament medium*ENSDARG0000004369739
desmb / desmin b / DES* / desmin* / P17661* / P31001*ENSDARG0000000522139
gfap / glial fibrillary acidic protein / P03995* / P14136*ENSDARG0000002530138
desma / desmin a / DES* / desmin* / P17661* / P31001*ENSDARG0000005865638
vim / vimentin / P08670* / P20152*ENSDARG0000001000838
nefla / neurofilament, light polypeptide a / NEFL* / P08551* / P07196* / neurofilament light* / Neurofilament light polypeptide *ENSDARG0000005756837
viml / vimentin like / VIM* / P08670* / vimentin*ENSDARG0000004450137
neflb / neurofilament, light polypeptide b / NEFL* / P08551* / P07196* / neurofilament light* / Neurofilament light polypeptide *ENSDARG0000001242635
prph / peripherin / P41219*ENSDARG0000002830635
si:dkey-33c12.3ENSDARG0000005788134
zgc:172323ENSDARG0000005320129
ngs / notochord granular surfaceENSDARG0000005432127
zgc:136930ENSDARG0000005519225
lmnl3 / lamin L3ENSDARG0000000775123
lmnb1 / lamin B1 / P14733* / P20700*ENSDARG0000004429922
lmnb2 / lamin B2 / P21619* / Q03252*ENSDARG0000010162422


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR002957  Keratin, type I
 IPR027697  Neurofilament medium polypeptide


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0061564 axon development IEA
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0005883 neurofilament IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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