ENSDARG00000053248


Danio rerio

Features
Gene ID: ENSDARG00000053248
  
Biological name :inab
  
Synonyms : inab / internexin neuronal intermediate filament protein, alpha b
  
Possible biological names infered from orthology : INA / internexin neuronal intermediate filament protein alpha / P46660 / Q16352
  
Species: Danio rerio
  
Chr. number: 1
Strand: 1
Band:
Gene start: 31864404
Gene end: 31867717
  
Corresponding Affymetrix probe sets: Dr.264.1.S1_at (Zebrafish Array)   NM_131032_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000069744
NCBI entrez gene - 30230     See in Manteia.
RefSeq - NM_131032
RefSeq Peptide - NP_571107
swissprot - F1Q8F1
ZFIN ID - ZDB-GENE-990415-83
Ensembl - ENSDARG00000053248
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 INAENSG00000148798Homo sapiens
 InaENSMUSG00000034336Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
inaa / internexin neuronal intermediate filament protein, alpha a / INA* / Q16352* / P46660* / internexin neuronal intermediate filament protein alpha*ENSDARG0000001186269
zgc:65851ENSDARG0000001228153
viml / vimentin like / VIM* / P08670* / vimentin*ENSDARG0000004450146
vim / vimentin / P08670* / P20152*ENSDARG0000001000846
nefma / neurofilament, medium polypeptide a / NEFM* / P07197* / neurofilament medium*ENSDARG0000002135145
desma / desmin a / DES* / desmin* / P17661* / P31001*ENSDARG0000005865645
gfap / glial fibrillary acidic protein / P03995* / P14136*ENSDARG0000002530143
desmb / desmin b / DES* / desmin* / P17661* / P31001*ENSDARG0000000522143
neflb / neurofilament, light polypeptide b / NEFL* / P08551* / P07196* / neurofilament light* / Neurofilament light polypeptide *ENSDARG0000001242642
nefla / neurofilament, light polypeptide a / NEFL* / P08551* / P07196* / neurofilament light* / Neurofilament light polypeptide *ENSDARG0000005756842
prph / peripherin / P41219*ENSDARG0000002830641
nefmb / neurofilament, medium polypeptide b / NEFM* / P07197* / neurofilament medium*ENSDARG0000004369741
si:dkey-33c12.3ENSDARG0000005788134
zgc:172323ENSDARG0000005320134
ngs / notochord granular surfaceENSDARG0000005432132
si:dkey-27m7.4ENSDARG0000000314631
lmnb1 / lamin B1 / P14733* / P20700*ENSDARG0000004429924
zgc:136930ENSDARG0000005519223
lmna / lamin A / P02545* / P48678* / lamin A/C* / Prelamin-A/C Lamin-A/C*ENSDARG0000001341523
lmnb2 / lamin B2 / P21619* / Q03252*ENSDARG0000010162422


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein
 IPR006821  Intermediate filament head, DNA-binding domain
 IPR018039  Intermediate filament protein, conserved site
 IPR027703  Alpha-internexin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0048812 neuron projection morphogenesis IMP
 cellular_componentGO:0005882 intermediate filament IEA
 cellular_componentGO:0005883 neurofilament IEA
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0005181 VaP motor neuron VaP motor neuron axon branchiness , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr