ENSG00000067182


Homo sapiens

Features
Gene ID: ENSG00000067182
  
Biological name :TNFRSF1A
  
Synonyms : P19438 / TNF receptor superfamily member 1A / TNFRSF1A
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: p13.31
Gene start: 6328757
Gene end: 6342114
  
Corresponding Affymetrix probe sets: 207643_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000438343
Ensembl peptide - ENSP00000439981
Ensembl peptide - ENSP00000441803
Ensembl peptide - ENSP00000442059
Ensembl peptide - ENSP00000442405
Ensembl peptide - ENSP00000442919
Ensembl peptide - ENSP00000162749
Ensembl peptide - ENSP00000380389
Ensembl peptide - ENSP00000413224
NCBI entrez gene - 7132     See in Manteia.
OMIM - 191190
RefSeq - NM_001065
RefSeq - NM_001346091
RefSeq Peptide - NP_001056
RefSeq Peptide - NP_001333020
swissprot - P19438
swissprot - F5GWJ4
swissprot - F5H061
swissprot - F5H4T5
swissprot - F5H6V7
swissprot - F5H6Z2
swissprot - F5H7N1
swissprot - F5H8A6
Ensembl - ENSG00000067182
  
Related genetic diseases (OMIM): 142680 - Periodic fever, familial, 142680
  614810 - {Multiple sclerosis, susceptibility to, 5}, 614810
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tnfrsf1aENSDARG00000018569Danio rerio
 TNFRSF1AENSGALG00000039461Gallus gallus
 P25118ENSMUSG00000030341Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q93038 / TNFRSF25 / TNF receptor superfamily member 25ENSG0000021578824


Protein motifs (from Interpro)
Interpro ID Name
 IPR000488  Death domain
 IPR001368  TNFR/NGFR cysteine-rich region
 IPR011029  Death-like domain superfamily
 IPR020419  Tumour necrosis factor receptor 1A
 IPR033993  Tumor necrosis factor receptor 1A, N-terminal
 IPR033994  Tumor necrosis factor receptor 1A, death domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006693 prostaglandin metabolic process IEA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0006952 defense response IEA
 biological_processGO:0006954 inflammatory response IEA
 biological_processGO:0006955 immune response IBA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007166 cell surface receptor signaling pathway IEA
 biological_processGO:0007249 I-kappaB kinase/NF-kappaB signaling TAS
 biological_processGO:0008625 extrinsic apoptotic signaling pathway via death domain receptors TAS
 biological_processGO:0008630 intrinsic apoptotic signaling pathway in response to DNA damage IEA
 biological_processGO:0010803 regulation of tumor necrosis factor-mediated signaling pathway TAS
 biological_processGO:0016032 viral process IEA
 biological_processGO:0019221 cytokine-mediated signaling pathway ISS
 biological_processGO:0032496 response to lipopolysaccharide IBA
 biological_processGO:0033209 tumor necrosis factor-mediated signaling pathway IEA
 biological_processGO:0042127 regulation of cell proliferation IBA
 biological_processGO:0042531 positive regulation of tyrosine phosphorylation of STAT protein IMP
 biological_processGO:0042742 defense response to bacterium IEA
 biological_processGO:0042981 regulation of apoptotic process IBA
 biological_processGO:0043123 positive regulation of I-kappaB kinase/NF-kappaB signaling IEP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II ISS
 biological_processGO:0050728 negative regulation of inflammatory response IMP
 biological_processGO:0050729 positive regulation of inflammatory response ISS
 biological_processGO:0071260 cellular response to mechanical stimulus IEP
 biological_processGO:0071550 death-inducing signaling complex assembly TAS
 biological_processGO:0072659 protein localization to plasma membrane IMP
 biological_processGO:1903140 regulation of establishment of endothelial barrier IMP
 biological_processGO:2000304 positive regulation of ceramide biosynthetic process TAS
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005739 mitochondrion IBA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043235 receptor complex IDA
 cellular_componentGO:0045121 membrane raft IDA
 molecular_functionGO:0005031 tumor necrosis factor-activated receptor activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0043120 tumor necrosis factor binding IBA


Pathways (from Reactome)
Pathway description
TNFR1-induced proapoptotic signaling
Regulation of TNFR1 signaling
TNFR1-induced NFkappaB signaling pathway
TNFR1-mediated ceramide production
TNFs bind their physiological receptors
Interleukin-10 signaling
TNF signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000509 Conjunctivitis "Inflammation of the conjunctiva." [HPO:curators]
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 HP:0000554 Uveitis "Inflammation of one or all portions of the uveal tract." [HPO:curators]
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 HP:0000708 Behavioural/Psychiatric Abnormality 
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 HP:0000969 Edema "An abnormal accumulation of fluid beneath the skin, or in one or more cavities of the body. Edema may be related to one or more of the following factors: 1) increased capillary hydrostatic pressure, 2) decreased osmotic pressure of plasma, 3) decreased tissue tension and lymphatic drainage, 4) increased osmotic pressure of tissue fluids, and 5) increased capillary permeability." [HPO:curators]
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 HP:0000978 Ecchymoses 
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 HP:0000988 Skin rash 
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 HP:0001034 Hyperpigmented macules 
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 HP:0001055 Erysipelas 
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 HP:0001369 Arthritis 
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 HP:0001637 Abnormality of the myocardium 
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 HP:0001701 Pericarditis 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001954 Fever, episodic "Periodic (episodic or recurrent) bouts of fever that do not have an infectious cause." [HPO:curators]
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 HP:0001974 Leukocytosis "An abnormal increase in the number of `leukocytes` (CL:0000738) in the `blood` (FMA:9670)." [HPO:probinson]
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 HP:0002013 Vomiting 
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 HP:0002014 Diarrhea 
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 HP:0002019 Constipation 
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 HP:0002027 Abdominal pain 
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 HP:0002076 Migraine 
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 HP:0002102 Pleuritis "Inflammation of the pleura." [HPO:sdoelken]
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 HP:0002321 Vertigo "An abnormal sensation of spinning while the body is actually stationary." [HPO:curators]
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 HP:0002586 Peritonitis 
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 HP:0002633 Vasculitis 
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 HP:0002716 Lymphadenopathy 
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 HP:0002829 Arthralgia 
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 HP:0003326 Myalgia "A tendency to experience muscle pain." [HPO:curators]
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 HP:0003401 Paresthesia "Abnormal sensations such as tingling, pricking, or numbness of the skin with no apparent physical cause." [HPO:curators]
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 HP:0003552 Muscle stiffness 
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 HP:0003565 Elevated erythrocyte sedimentation rate 
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 HP:0005214 Intestinal obstruction 
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 HP:0006824 Cranial nerve paralysis 
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 HP:0010783 Erythema "Redness of the skin, caused by hyperemia of the capillaries in the lower layers of the skin." [HPO:probinson]
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 HP:0011034 Amyloidosis "The presence of `amyloid deposition` (MPATH:34) in one or more tissues. Amyloidosis may be defined as the exrtracellular deposition of amyloid in one or more sites of the body." [HPO:probinson, pmid:21039326]
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 HP:0011227 Elevated C-reactive protein level "An abnormal elevation of the C-reactive protein level in serum." [HPO:probinson]
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 HP:0012280 Hepatic amyloidosis "A form of `amyloidosis` (HP:0011034) that affects the liver." [HPO:probinson]
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 HP:0030953 Conjunctival hyperemia "Dilatation of the blood vessels of the conjunctiva leading to a red appearance of the sclera." []
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 HP:0100537 Fasciitis "`Inflammation` (MPATH:212) of `fascia` (FMA:30318)." [HPO:probinson]
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 HP:0100539 Periorbital edema 
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 HP:0100614 Myositis "A general term for inflammation of the muscles without respect to the underlying cause." [HPO:sdoelken]
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 HP:0100658 Cellulitis 
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 HP:0100749 Chest pain 
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 HP:0100776 Recurrent pharyngitis "An increased susceptibility to pharyngitis as manifested by a history of recurrent pharyngitis." [HPO:probinson]
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 HP:0100781 Abnormality of the sacroiliac joint 
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 HP:0100796 Orchitis "Testicular inflammation." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000035681 NSMAF / Q92636 / neutral sphingomyelinase activation associated factor  / reaction / complex
 ENSG00000135587 SMPD2 / O60906 / sphingomyelin phosphodiesterase 2  / reaction / complex
 ENSG00000103056 SMPD3 / Q9NY59 / sphingomyelin phosphodiesterase 3  / reaction / complex
 ENSG00000204628 RACK1 / P63244 / receptor for activated C kinase 1  / reaction / complex
 ENSG00000110514 MADD / Q8WXG6 / MAP kinase activating death domain  / reaction / complex
 ENSG00000226979 LTA / P01374 / lymphotoxin alpha  / reaction / complex
 ENSG00000137275 RIPK1 / Q13546 / receptor interacting serine/threonine kinase 1  / reaction / complex
 ENSG00000067182 P19438 / TNFRSF1A / TNF receptor superfamily member 1A  / complex
 ENSG00000110330 BIRC2 / Q13490 / baculoviral IAP repeat containing 2  / reaction / complex
 ENSG00000127191 TRAF2 / Q12933 / TNF receptor associated factor 2  / complex / reaction
 ENSG00000023445 BIRC3 / Q13489 / baculoviral IAP repeat containing 3  / complex / reaction
 ENSG00000156735 BAG4 / O95429 / BCL2 associated athanogene 4  / complex
 ENSG00000102871 TRADD / Q15628 / TNFRSF1A associated via death domain  / reaction / complex
 ENSG00000232810 TNF / P01375 / tumor necrosis factor  / complex / reaction






 

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