ENSG00000147044


Homo sapiens

Features
Gene ID: ENSG00000147044
  
Biological name :CASK
  
Synonyms : calcium/calmodulin dependent serine protein kinase / CASK / O14936
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: p11.4
Gene start: 41514934
Gene end: 41923645
  
Corresponding Affymetrix probe sets: 207620_s_at (Human Genome U133 Plus 2.0 Array)   211208_s_at (Human Genome U133 Plus 2.0 Array)   227156_at (Human Genome U133 Plus 2.0 Array)   238698_at (Human Genome U133 Plus 2.0 Array)   238699_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000496025
Ensembl peptide - ENSP00000496319
Ensembl peptide - ENSP00000367396
Ensembl peptide - ENSP00000367400
Ensembl peptide - ENSP00000367405
Ensembl peptide - ENSP00000367408
Ensembl peptide - ENSP00000367410
Ensembl peptide - ENSP00000367421
Ensembl peptide - ENSP00000398007
Ensembl peptide - ENSP00000400526
Ensembl peptide - ENSP00000493518
Ensembl peptide - ENSP00000493700
Ensembl peptide - ENSP00000494144
Ensembl peptide - ENSP00000494183
Ensembl peptide - ENSP00000494388
Ensembl peptide - ENSP00000494409
Ensembl peptide - ENSP00000494788
Ensembl peptide - ENSP00000495232
Ensembl peptide - ENSP00000495291
Ensembl peptide - ENSP00000495357
Ensembl peptide - ENSP00000495510
NCBI entrez gene - 8573     See in Manteia.
OMIM - 300172
RefSeq - NM_001126054
RefSeq - NM_001126055
RefSeq - NM_003688
RefSeq - XM_005272686
RefSeq - XM_006724566
RefSeq - XM_011543993
RefSeq - XM_011543994
RefSeq - XM_011543995
RefSeq - XM_011543996
RefSeq - XM_011543997
RefSeq Peptide - NP_001119526
RefSeq Peptide - NP_001119527
RefSeq Peptide - NP_003679
swissprot - O14936
swissprot - Q5JS72
swissprot - Q5JS74
swissprot - Q5JS79
Ensembl - ENSG00000147044
  
Related genetic diseases (OMIM): 300422 - FG syndrome 4, 300422
  300749 - Mental retardation and microcephaly with pontine and cerebellar hypoplasia, 300749
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 caskaENSDARG00000059809Danio rerio
 caskbENSDARG00000100119Danio rerio
 CASKENSGALG00000042400Gallus gallus
 CaskENSMUSG00000031012Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MPP1 / Q00013 / membrane palmitoylated protein 1ENSG0000013083028
MPP2 / Q14168 / membrane palmitoylated protein 2ENSG0000010885226
MPP6 / Q9NZW5 / membrane palmitoylated protein 6ENSG0000010592624
MPP7 / Q5T2T1 / membrane palmitoylated protein 7ENSG0000015005420
MPP3 / Q13368 / membrane palmitoylated protein 3ENSG0000016164718
MPP4 / Q96JB8 / membrane palmitoylated protein 4ENSG0000008212618
MPP5 / Q8N3R9 / membrane palmitoylated protein 5ENSG0000007241518
DLG2 / Q15700 / discs large MAGUK scaffold protein 2ENSG0000015067216
DLG1 / Q12959 / discs large MAGUK scaffold protein 1ENSG0000007571116
DLG4 / P78352 / discs large MAGUK scaffold protein 4ENSG0000013253515
DLG3 / Q92796 / discs large MAGUK scaffold protein 3ENSG0000008245815
DLG5 / Q8TDM6 / discs large MAGUK scaffold protein 5ENSG0000015120814
TJP2 / Q9UDY2 / tight junction protein 2ENSG0000011913912
AL358113.1ENSG0000028513012
TJP3 / O95049 / tight junction protein 3ENSG0000010528911
TJP1 / Q07157 / tight junction protein 1ENSG0000010406711
GUK1 / Q16774 / guanylate kinase 1ENSG000001437745


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR001452  SH3 domain
 IPR001478  PDZ domain
 IPR004172  L27 domain
 IPR008144  Guanylate kinase-like domain
 IPR008145  Guanylate kinase/L-type calcium channel beta subunit
 IPR011009  Protein kinase-like domain superfamily
 IPR014775  L27 domain, C-terminal
 IPR020590  Guanylate kinase, conserved site
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR035473  CASK, SH3 domain
 IPR036028  SH3-like domain superfamily
 IPR036034  PDZ superfamily
 IPR036892  L27 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001953 negative regulation of cell-matrix adhesion IMP
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0007155 cell adhesion TAS
 biological_processGO:0007269 neurotransmitter secretion TAS
 biological_processGO:0010839 negative regulation of keratinocyte proliferation IMP
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IGI
 biological_processGO:0046037 GMP metabolic process IEA
 biological_processGO:0046710 GDP metabolic process IEA
 biological_processGO:0061045 negative regulation of wound healing IMP
 biological_processGO:0070509 calcium ion import IMP
 biological_processGO:0090280 positive regulation of calcium ion import IDA
 biological_processGO:0090288 negative regulation of cellular response to growth factor stimulus IMP
 cellular_componentGO:0005604 basement membrane IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005652 nuclear lamina IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005911 cell-cell junction IDA
 cellular_componentGO:0005925 focal adhesion HDA
 cellular_componentGO:0015629 actin cytoskeleton TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016323 basolateral plasma membrane IDA
 cellular_componentGO:0016363 nuclear matrix IDA
 cellular_componentGO:0031982 vesicle IDA
 cellular_componentGO:0042734 presynaptic membrane ISS
 cellular_componentGO:0045202 synapse IDA
 cellular_componentGO:0060170 ciliary membrane ISS
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004385 guanylate kinase activity TAS
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity IEA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0005516 calmodulin binding IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0042043 neurexin family protein binding IDA


Pathways (from Reactome)
Pathway description
Dopamine Neurotransmitter Release Cycle
Syndecan interactions
Nephrin family interactions
Neurexins and neuroligins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000253 Microcephaly, progressive "Progressive microcephaly is diagnosed when the head circumference falls progressively behind age- and gender-dependent norms." [HPO:curators]
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000300 Oval face 
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 HP:0000316 Hypertelorism 
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 HP:0000337 Broad forehead "Abnormally large side-to-side distance of the forehead." [HPO:curators]
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 HP:0000343 Long philtrum 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000400 Large ears 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000426 Prominent nasal bridge 
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000455 Broad nasal tip 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000505 Impaired vision 
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000543 Pale optic disks 
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 HP:0000545 Myopia 
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 HP:0000567 Chorioretinal coloboma 
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 HP:0000609 Optic nerve hypoplasia 
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000648 Optic atrophy 
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 HP:0000966 Hypohidrosis "Abnormally diminished capacity to sweat." [HPO:curators]
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 HP:0001090 Large eyes 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001344 Absent speech development 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001417 X-linked inheritance "A mode of inheritance that is observed for traits related to a gene encoded on the X chromosome." [HPO:curators]
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 HP:0001423 X-linked dominant inheritance "A mode of inheritance that is observed for dominant traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked dominant disorders tend to manifest very severely in affected males. The severity of manifestation in females may depend on the degree of skewed X inactivation." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0002063 Rigidity 
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002198 Enlarged fourth ventricle 
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 HP:0002342 Mental retardation, moderate "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 35-49." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004325 Decreased body weight 
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 HP:0007227 Brain macrogyria and polymicrogyria 
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 HP:0008872 Feeding problems in infancy 
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 HP:0008897 Growth retardation, progressive 
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 HP:0008936 Muscular hypotonia of the trunk "Muscular hypotonia (abnormally low muscle tone) affecting the musculature of the trunk." [HPO:curators]
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0011344 Severe global developmental delay "A severe delay in the achievement of motor or mental milestones in the domains of development of a child." [DDD:hvfirth]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000104863 LIN7B / Q9HAP6 / lin-7 homolog B, crumbs cell polarity complex component  / complex / reaction
 ENSG00000111052 LIN7A / O14910 / lin-7 homolog A, crumbs cell polarity complex component  / complex / reaction
 ENSG00000148943 LIN7C / Q9NUP9 / lin-7 homolog C, crumbs cell polarity complex component  / complex / reaction
 ENSG00000161270 NPHS1 / O60500 / NPHS1, nephrin  / reaction / complex
 ENSG00000183853 Q96J84 / KIRREL1 / kirre like nephrin family adhesion molecule 1  / complex / reaction
 ENSG00000115109 Q9HCM4 / EPB41L5 / erythrocyte membrane protein band 4.1 like 5  / reaction / complex
 ENSG00000159023 EPB41 / P11171 / erythrocyte membrane protein band 4.1  / reaction / complex
 ENSG00000082397 Q9Y2J2 / EPB41L3 / erythrocyte membrane protein band 4.1 like 3  / complex / reaction
 ENSG00000079819 O43491 / EPB41L2 / erythrocyte membrane protein band 4.1 like 2  / complex / reaction
 ENSG00000107282 APBA1 / Q02410 / amyloid beta precursor protein binding family A member 1  / complex / reaction






 

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