ENSG00000152822


Homo sapiens

Features
Gene ID: ENSG00000152822
  
Biological name :GRM1
  
Synonyms : glutamate metabotropic receptor 1 / GRM1 / Q13255
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: q24.3
Gene start: 146027646
Gene end: 146437598
  
Corresponding Affymetrix probe sets: 207299_s_at (Human Genome U133 Plus 2.0 Array)   210939_s_at (Human Genome U133 Plus 2.0 Array)   210940_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000354896
Ensembl peptide - ENSP00000282753
Ensembl peptide - ENSP00000347437
Ensembl peptide - ENSP00000424095
Ensembl peptide - ENSP00000425599
NCBI entrez gene - 2911     See in Manteia.
OMIM - 604473
RefSeq - XM_017010788
RefSeq - NM_001278064
RefSeq - NM_001278065
RefSeq - NM_001278066
RefSeq - NM_001278067
RefSeq - XM_017010783
RefSeq - XM_017010784
RefSeq - XM_017010785
RefSeq - XM_017010786
RefSeq - XM_017010787
RefSeq - XM_011535782
RefSeq Peptide - NP_001264994
RefSeq Peptide - NP_001264995
RefSeq Peptide - NP_001264996
RefSeq Peptide - NP_001264993
swissprot - Q13255
Ensembl - ENSG00000152822
  
Related genetic diseases (OMIM): 614831 - Spinocerebellar ataxia, autosomal recessive 13, 614831
  617691 - Spinocerebellar ataxia 44, 617691
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 grm1aENSDARG00000026796Danio rerio
 grm1bENSDARG00000098320Danio rerio
 GRM1ENSGALG00000012297Gallus gallus
 Grm1ENSMUSG00000019828Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GRM5 / P41594 / glutamate metabotropic receptor 5ENSG0000016895961
GRM2 / Q14416 / glutamate metabotropic receptor 2ENSG0000016408232
GRM4 / Q14833 / glutamate metabotropic receptor 4ENSG0000012449331
GRM3 / Q14832 / glutamate metabotropic receptor 3ENSG0000019882231
GRM8 / O00222 / glutamate metabotropic receptor 8ENSG0000017960331
GRM7 / Q14831 / glutamate metabotropic receptor 7ENSG0000019627730
GRM6 / O15303 / glutamate metabotropic receptor 6ENSG0000011326229
GPRC6A / Q5T6X5 / G protein-coupled receptor class C group 6 member AENSG0000017361219
Q7RTX1 / TAS1R1 / taste 1 receptor member 1ENSG0000017366217
Q8TE23 / TAS1R2 / taste 1 receptor member 2ENSG0000017900216
Q7RTX0 / TAS1R3 / taste 1 receptor member 3ENSG0000016996215


Protein motifs (from Interpro)
Interpro ID Name
 IPR000162  GPCR, family 3, metabotropic glutamate receptor
 IPR000337  GPCR, family 3
 IPR001256  GPCR, family 3, metabotropic glutamate receptor 1
 IPR001828  Receptor, ligand binding region
 IPR011500  GPCR, family 3, nine cysteines domain
 IPR017978  GPCR family 3, C-terminal
 IPR017979  GPCR, family 3, conserved site
 IPR019588  Metabotropic glutamate receptor, Homer-binding domain
 IPR028082  Periplasmic binding protein-like I


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000186 activation of MAPKK activity IEA
 biological_processGO:0000187 activation of MAPK activity IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway TAS
 biological_processGO:0007196 adenylate cyclase-inhibiting G-protein coupled glutamate receptor signaling pathway IBA
 biological_processGO:0007216 G-protein coupled glutamate receptor signaling pathway IMP
 biological_processGO:0007268 chemical synaptic transmission TAS
 biological_processGO:0007626 locomotory behavior IEA
 biological_processGO:0019233 sensory perception of pain IEA
 biological_processGO:0043408 regulation of MAPK cascade IEA
 biological_processGO:0051482 positive regulation of cytosolic calcium ion concentration involved in phospholipase C-activating G-protein coupled signaling pathway IMP
 biological_processGO:0051930 regulation of sensory perception of pain IEA
 biological_processGO:0051966 regulation of synaptic transmission, glutamatergic IBA
 biological_processGO:0071257 cellular response to electrical stimulus IEA
 biological_processGO:0099566 regulation of postsynaptic cytosolic calcium ion concentration IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0014069 postsynaptic density IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0038037 G-protein coupled receptor dimeric complex IDA
 cellular_componentGO:0038038 G-protein coupled receptor homodimeric complex IPI
 cellular_componentGO:0042734 presynaptic membrane IBA
 cellular_componentGO:0043005 neuron projection IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008066 glutamate receptor activity TAS
 molecular_functionGO:0099583 neurotransmitter receptor activity involved in regulation of postsynaptic cytosolic calcium ion concentration IEA


Pathways (from Reactome)
Pathway description
G alpha (q) signalling events
Class C/3 (Metabotropic glutamate/pheromone receptors)
Neurexins and neuroligins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000565 Esotropia 
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 HP:0000571 Hypometric saccades 
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 HP:0000666 Nystagmus, horizontal 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001271 Polyneuropathy "A generalized disorder of peripheral nerves." [HPO:curators]
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 HP:0001272 Cerebellar atrophy 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001310 Dysmetria 
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001344 Absent speech development 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0002066 Gait ataxia "Impairment of the ability to coordinate the movements required for normal walking." [HPO:curators]
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 HP:0002075 Dysdiadochokinesis "An inability to perform rapidly alternating movements, such as rhythmically tapping the fingers on the knee, generally related to a cerebellar lesion." [HPO:curators]
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 HP:0002119 Ventriculomegaly 
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 HP:0002406 Limb dysmetria 
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 HP:0003593 Early onset 
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 HP:0003677 Slow progression 
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 HP:0003698 Difficulty standing 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0006951 Retrocerebellar cyst 
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 HP:0007068 Inferior vermis hypoplasia 
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 HP:0007256 Mild pyramidal signs 
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 HP:0007979 Gaze-evoked horizontal nystagmus "Horizontal nystagmus made apparent by looking to the right or to the left." [HPO:curators]
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 HP:0011347 Abnormality of ocular abduction "An abnormality involving the movement of the eye outwards." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000082458 DLG3 / Q92796 / discs large MAGUK scaffold protein 3  / complex / reaction
 ENSG00000051128 HOMER3 / Q9NSC5 / homer scaffolding protein 3  / complex / reaction
 ENSG00000116544 DLGAP3 / O95886 / DLG associated protein 3  / reaction / complex
 ENSG00000152413 HOMER1 / Q86YM7 / homer scaffolding protein 1  / reaction / complex
 ENSG00000103942 HOMER2 / Q9NSB8 / homer scaffolding protein 2  / reaction / complex
 ENSG00000150672 DLG2 / Q15700 / discs large MAGUK scaffold protein 2  / reaction / complex
 ENSG00000161681 Q9Y566 / SHANK1 / SH3 and multiple ankyrin repeat domains 1  / reaction / complex
 ENSG00000132535 DLG4 / P78352 / discs large MAGUK scaffold protein 4  / complex / reaction
 ENSG00000170579 DLGAP1 / O14490 / DLG associated protein 1  / reaction / complex
 ENSG00000080845 DLGAP4 / Q9Y2H0 / DLG associated protein 4  / reaction / complex
 ENSG00000162105 Q9UPX8 / SHANK2 / SH3 and multiple ankyrin repeat domains 2  / complex / reaction
 ENSG00000198010 DLGAP2 / Q9P1A6 / DLG associated protein 2  / complex / reaction






 

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