ENSG00000182621


Homo sapiens

Features
Gene ID: ENSG00000182621
  
Biological name :PLCB1
  
Synonyms : phospholipase C beta 1 / PLCB1 / Q9NQ66
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: 1
Band: p12.3
Gene start: 8077251
Gene end: 8968360
  
Corresponding Affymetrix probe sets: 211925_s_at (Human Genome U133 Plus 2.0 Array)   213222_at (Human Genome U133 Plus 2.0 Array)   215687_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000489643
Ensembl peptide - ENSP00000490455
Ensembl peptide - ENSP00000490641
Ensembl peptide - ENSP00000490771
Ensembl peptide - ENSP00000490792
Ensembl peptide - ENSP00000490862
Ensembl peptide - ENSP00000389911
Ensembl peptide - ENSP00000391162
Ensembl peptide - ENSP00000431704
Ensembl peptide - ENSP00000477664
Ensembl peptide - ENSP00000479997
Ensembl peptide - ENSP00000486301
Ensembl peptide - ENSP00000486428
Ensembl peptide - ENSP00000486531
Ensembl peptide - ENSP00000486655
Ensembl peptide - ENSP00000487075
Ensembl peptide - ENSP00000487544
Ensembl peptide - ENSP00000338185
Ensembl peptide - ENSP00000367904
Ensembl peptide - ENSP00000367908
Ensembl peptide - ENSP00000384001
NCBI entrez gene - 23236     See in Manteia.
OMIM - 607120
RefSeq - NM_182734
RefSeq - XM_017027752
RefSeq - XM_011529201
RefSeq - NM_015192
RefSeq - XM_011529199
RefSeq - XM_011529200
RefSeq - XM_017027753
RefSeq Peptide - NP_877398
RefSeq Peptide - NP_056007
swissprot - Q8IV92
swissprot - A0A087WT80
swissprot - A0A087WW73
swissprot - A0A0D9SF51
swissprot - A0A0D9SFA6
swissprot - A0A0D9SFE7
swissprot - A0A0D9SFJ4
swissprot - A0A0D9SG17
swissprot - A0A0D9SGI7
swissprot - A0A1B0GTC7
swissprot - A0A1B0GVC1
swissprot - A0A1B0GVT0
swissprot - A0A1B0GW45
swissprot - A0A1B0GW62
swissprot - A0A1B0GWB6
swissprot - B1AK73
swissprot - H0YCJ2
swissprot - Q8IV91
swissprot - Q9NQ66
Ensembl - ENSG00000182621
  
Related genetic diseases (OMIM): 613722 - Epileptic encephalopathy, early infantile, 12, 613722
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 PLCB1ENSDARG00000109726Danio rerio
 PLCB1ENSGALG00000008875Gallus gallus
 Plcb1ENSMUSG00000051177Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
PLCB3 / Q01970 / phospholipase C beta 3ENSG0000014978255
PLCB2 / Q00722 / phospholipase C beta 2ENSG0000013784146
PLCB4 / Q15147 / phospholipase C beta 4ENSG0000010133339
PLCH2 / O75038 / phospholipase C eta 2ENSG0000014952723
PLCH1 / Q4KWH8 / phospholipase C eta 1ENSG0000011480522
PLCL2 / Q9UPR0 / phospholipase C like 2ENSG0000015482222
PLCL1 / Q15111 / phospholipase C like 1 (inactive)ENSG0000011589622
PLCD4 / Q9BRC7 / phospholipase C delta 4ENSG0000011555620
PLCD1 / P51178 / phospholipase C delta 1ENSG0000018709119
PLCD3 / Q8N3E9 / phospholipase C delta 3ENSG0000016171418
PLCZ1 / Q86YW0 / phospholipase C zeta 1ENSG0000013915117


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR000909  Phosphatidylinositol-specific phospholipase C, X domain
 IPR001192  Phosphoinositide phospholipase C family
 IPR001711  Phospholipase C, phosphatidylinositol-specific, Y domain
 IPR009535  Phospholipase C-beta, conserved site
 IPR011992  EF-hand domain pair
 IPR011993  PH-like domain superfamily
 IPR014815  Phospholipase C-beta, C-terminal domain
 IPR015359  Phosphoinositide-specific phospholipase C, EF-hand-like domain
 IPR016280  Phosphatidylinositol-4, 5-bisphosphate phosphodiesterase beta
 IPR017946  PLC-like phosphodiesterase, TIM beta/alpha-barrel domain superfamily
 IPR028400  1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-1
 IPR035892  C2 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000086 G2/M transition of mitotic cell cycle ISS
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway TAS
 biological_processGO:0007213 G-protein coupled acetylcholine receptor signaling pathway ISS
 biological_processGO:0007215 glutamate receptor signaling pathway ISS
 biological_processGO:0007223 Wnt signaling pathway, calcium modulating pathway TAS
 biological_processGO:0007420 brain development IEA
 biological_processGO:0007613 memory ISS
 biological_processGO:0008277 regulation of G-protein coupled receptor protein signaling pathway ISS
 biological_processGO:0016042 lipid catabolic process IEA
 biological_processGO:0021987 cerebral cortex development ISS
 biological_processGO:0032735 positive regulation of interleukin-12 production ISS
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0035722 interleukin-12-mediated signaling pathway IDA
 biological_processGO:0035723 interleukin-15-mediated signaling pathway IDA
 biological_processGO:0040019 positive regulation of embryonic development ISS
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0043647 inositol phosphate metabolic process TAS
 biological_processGO:0045444 fat cell differentiation IEA
 biological_processGO:0045663 positive regulation of myoblast differentiation ISS
 biological_processGO:0045892 negative regulation of transcription, DNA-templated ISS
 biological_processGO:0045893 positive regulation of transcription, DNA-templated ISS
 biological_processGO:0046330 positive regulation of JNK cascade IDA
 biological_processGO:0046488 phosphatidylinositol metabolic process ISS
 biological_processGO:0048009 insulin-like growth factor receptor signaling pathway ISS
 biological_processGO:0048639 positive regulation of developmental growth ISS
 biological_processGO:0051726 regulation of cell cycle IEA
 biological_processGO:0060466 activation of meiosis involved in egg activation ISS
 biological_processGO:0070498 interleukin-1-mediated signaling pathway IDA
 biological_processGO:0080154 regulation of fertilization ISS
 biological_processGO:1900087 positive regulation of G1/S transition of mitotic cell cycle ISS
 biological_processGO:2000344 positive regulation of acrosome reaction ISS
 biological_processGO:2000438 negative regulation of monocyte extravasation ISS
 biological_processGO:2000560 positive regulation of CD24 biosynthetic process ISS
 cellular_componentGO:0000790 nuclear chromatin ISS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016607 nuclear speck IDA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0043209 myelin sheath IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004435 phosphatidylinositol phospholipase C activity ISS
 molecular_functionGO:0004629 phospholipase C activity TAS
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0005096 GTPase activator activity IDA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005516 calmodulin binding IDA
 molecular_functionGO:0005521 lamin binding IEA
 molecular_functionGO:0005546 phosphatidylinositol-4,5-bisphosphate binding IDA
 molecular_functionGO:0008081 phosphoric diester hydrolase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0019899 enzyme binding IPI
 molecular_functionGO:0042803 protein homodimerization activity ISS


Pathways (from Reactome)
Pathway description
PLC beta mediated events
Synthesis of IP3 and IP4 in the cytosol
Acetylcholine regulates insulin secretion
Ca2+ pathway
G alpha (q) signalling events
G beta:gamma signalling through PLC beta
Fatty Acids bound to GPR40 (FFAR1) regulate insulin secretion
Presynaptic function of Kainate receptors


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0002197 Generalized seizures "Recurrent generalized `seizures` (HP:0001250), that is seizures that affect both cerebral hemispheres from the start of the seizure, producing loss of consciousness." [HPO:probinson]
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 HP:0002376 Developmental regression 
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 HP:0002521 Hypsarrhythmia "Hypsarrhythmia is abnormal interictal high amplitude waves and a background of irregular spikes demonstrated by electroencephalography (EEG)." [HPO:curators]
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 HP:0007359 Partial seizures "Recurrent partial `seizures` (HP:0001250). In a partial seizure, the electrical disturbance is limited to one part or side of the brain. That is, partial epilepsies are epileptic disorders in which clinical or laboratory findings disclose a localized origin of seizures." [HPO:curators]
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 HP:0008936 Muscular hypotonia of the trunk "Muscular hypotonia (abnormally low muscle tone) affecting the musculature of the trunk." [HPO:curators]
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 HP:0011121 Abnormality of skin morphology "Any morphological abnormality of the `skin` (FMA:7163)." [HPO:probinson]
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 HP:0012469 Infantile spasms "Infantile spasms represent a subset of "epileptic spasms". Infantile Spasms are epileptic spasms starting in the first year of life (infancy)." [HPO:ihelbig]
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 HP:0200134 Epileptic encephalopathy 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000088256 GNA11 / P29992 / G protein subunit alpha 11  / reaction / complex
 ENSG00000060558 GNA15 / P30679 / G protein subunit alpha 15  / reaction / complex
 ENSG00000137841 PLCB2 / Q00722 / phospholipase C beta 2  / reaction
 ENSG00000101333 PLCB4 / Q15147 / phospholipase C beta 4  / reaction
 ENSG00000149782 PLCB3 / Q01970 / phospholipase C beta 3  / reaction
 ENSG00000156052 GNAQ / P50148 / G protein subunit alpha q  / reaction / complex
 ENSG00000156049 GNA14 / O95837 / G protein subunit alpha 14  / complex / reaction
 ENSG00000186469 GNG2 / P59768 / G protein subunit gamma 2  / complex / reaction
 ENSG00000182621 PLCB1 / Q9NQ66 / phospholipase C beta 1  / reaction
 ENSG00000163873 GRIK3 / Q13003 / glutamate ionotropic receptor kainate type subunit 3  / complex / reaction
 ENSG00000078369 GNB1 / P62873 / G protein subunit beta 1  / complex / reaction






 

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