ENSG00000106571


Homo sapiens

Features
Gene ID: ENSG00000106571
  
Biological name :GLI3
  
Synonyms : GLI3 / GLI family zinc finger 3 / P10071
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: p14.1
Gene start: 41960950
Gene end: 42237870
  
Corresponding Affymetrix probe sets: 1569342_at (Human Genome U133 Plus 2.0 Array)   205201_at (Human Genome U133 Plus 2.0 Array)   227376_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000495498
Ensembl peptide - ENSP00000495745
Ensembl peptide - ENSP00000496377
Ensembl peptide - ENSP00000379258
Ensembl peptide - ENSP00000406135
Ensembl peptide - ENSP00000407963
Ensembl peptide - ENSP00000495207
NCBI entrez gene - 2737     See in Manteia.
OMIM - 165240
RefSeq - XM_011515274
RefSeq - XM_017011997
RefSeq - NM_000168
RefSeq Peptide - NP_000159
swissprot - P10071
swissprot - C9J9N4
swissprot - F8WEV4
Ensembl - ENSG00000106571
  
Related genetic diseases (OMIM): 146510 - Pallister-Hall syndrome, 146510
  174200 - Polydactyly, postaxial, types A1 and B, 174200
  174700 - Polydactyly, preaxial, type IV, 174700
  175700 - Greig cephalopolysyndactyly syndrome, 175700
  241800 - {Hypothalamic hamartomas, somatic}, 241800

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GLI3ENSGALG00000040266Gallus gallus
 Gli3ENSMUSG00000021318Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GLI2 / P10070 / GLI family zinc finger 2ENSG0000007404745
GLI1 / P08151 / GLI family zinc finger 1ENSG0000011108727
GLIS3 / Q8NEA6 / GLIS family zinc finger 3ENSG0000010724917
GLIS1 / Q8NBF1 / GLIS family zinc finger 1ENSG0000017433212
ZIC5 / Q96T25 / Zic family member 5ENSG0000013980010
GLIS2 / Q9BZE0 / GLIS family zinc finger 2ENSG0000012660310
ZIC3 / O60481 / Zic family member 3ENSG000001569259
ZIC1 / Q15915 / Zic family member 1ENSG000001529779
ZIC2 / O95409 / Zic family member 2ENSG000000433559
ZIC4 / Q8N9L1 / Zic family member 4ENSG000001749637


Protein motifs (from Interpro)
Interpro ID Name
 IPR013087  Zinc finger C2H2-type
 IPR032851  Transcription factor GLI3
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0001656 metanephros development IEA
 biological_processGO:0001658 branching involved in ureteric bud morphogenesis IEA
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0001822 kidney development IEA
 biological_processGO:0002052 positive regulation of neuroblast proliferation IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0007224 smoothened signaling pathway IEA
 biological_processGO:0007389 pattern specification process IEA
 biological_processGO:0007411 axon guidance IEA
 biological_processGO:0007417 central nervous system development IEA
 biological_processGO:0007420 brain development IEA
 biological_processGO:0007442 hindgut morphogenesis IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0008285 negative regulation of cell proliferation IEA
 biological_processGO:0009952 anterior/posterior pattern specification IEA
 biological_processGO:0009953 dorsal/ventral pattern formation IEA
 biological_processGO:0009954 proximal/distal pattern formation IEA
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0016485 protein processing IEA
 biological_processGO:0021513 spinal cord dorsal/ventral patterning IEA
 biological_processGO:0021522 spinal cord motor neuron differentiation IEA
 biological_processGO:0021537 telencephalon development IEA
 biological_processGO:0021543 pallium development IEA
 biological_processGO:0021544 subpallium development IEA
 biological_processGO:0021631 optic nerve morphogenesis IEA
 biological_processGO:0021766 hippocampus development IEA
 biological_processGO:0021775 smoothened signaling pathway involved in ventral spinal cord interneuron specification IEA
 biological_processGO:0021776 smoothened signaling pathway involved in spinal cord motor neuron cell fate specification IEA
 biological_processGO:0021798 forebrain dorsal/ventral pattern formation IEA
 biological_processGO:0021801 cerebral cortex radial glia guided migration IEA
 biological_processGO:0021819 layer formation in cerebral cortex IEA
 biological_processGO:0021861 forebrain radial glial cell differentiation IEA
 biological_processGO:0021915 neural tube development IEA
 biological_processGO:0022018 lateral ganglionic eminence cell proliferation IEA
 biological_processGO:0030318 melanocyte differentiation IEA
 biological_processGO:0030324 lung development IEA
 biological_processGO:0030326 embryonic limb morphogenesis IEA
 biological_processGO:0030850 prostate gland development IEA
 biological_processGO:0030879 mammary gland development IEA
 biological_processGO:0030900 forebrain development IEA
 biological_processGO:0032332 positive regulation of chondrocyte differentiation IEA
 biological_processGO:0033077 T cell differentiation in thymus IEA
 biological_processGO:0035108 limb morphogenesis IEA
 biological_processGO:0035295 tube development IEA
 biological_processGO:0042060 wound healing IEA
 biological_processGO:0042127 regulation of cell proliferation IEA
 biological_processGO:0042307 positive regulation of protein import into nucleus IEA
 biological_processGO:0042475 odontogenesis of dentin-containing tooth IEA
 biological_processGO:0042733 embryonic digit morphogenesis IEA
 biological_processGO:0042981 regulation of apoptotic process IEA
 biological_processGO:0043010 camera-type eye development IEA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 biological_processGO:0043585 nose morphogenesis TAS
 biological_processGO:0043586 tongue development IEA
 biological_processGO:0043627 response to estrogen IEA
 biological_processGO:0045060 negative thymic T cell selection IEA
 biological_processGO:0045595 regulation of cell differentiation IEA
 biological_processGO:0045596 negative regulation of cell differentiation IEA
 biological_processGO:0045665 negative regulation of neuron differentiation IEA
 biological_processGO:0045669 positive regulation of osteoblast differentiation IEA
 biological_processGO:0045879 negative regulation of smoothened signaling pathway IEA
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0046638 positive regulation of alpha-beta T cell differentiation IEA
 biological_processGO:0046639 negative regulation of alpha-beta T cell differentiation IEA
 biological_processGO:0048557 embryonic digestive tract morphogenesis IEA
 biological_processGO:0048566 embryonic digestive tract development TAS
 biological_processGO:0048568 embryonic organ development IEA
 biological_processGO:0048589 developmental growth IEA
 biological_processGO:0048593 camera-type eye morphogenesis IEA
 biological_processGO:0048598 embryonic morphogenesis IEA
 biological_processGO:0048646 anatomical structure formation involved in morphogenesis IEA
 biological_processGO:0048663 neuron fate commitment IEA
 biological_processGO:0048704 embryonic skeletal system morphogenesis IEA
 biological_processGO:0048709 oligodendrocyte differentiation IEA
 biological_processGO:0048754 branching morphogenesis of an epithelial tube IEA
 biological_processGO:0048839 inner ear development IEA
 biological_processGO:0048856 anatomical structure development IEA
 biological_processGO:0060021 roof of mouth development IEA
 biological_processGO:0060173 limb development IEA
 biological_processGO:0060364 frontal suture morphogenesis IEA
 biological_processGO:0060366 lambdoid suture morphogenesis IEA
 biological_processGO:0060367 sagittal suture morphogenesis IEA
 biological_processGO:0060594 mammary gland specification IEA
 biological_processGO:0060831 smoothened signaling pathway involved in dorsal/ventral neural tube patterning IEA
 biological_processGO:0060840 artery development IEA
 biological_processGO:0060873 anterior semicircular canal development IEA
 biological_processGO:0060875 lateral semicircular canal development IEA
 biological_processGO:0061005 cell differentiation involved in kidney development IEA
 biological_processGO:0070242 thymocyte apoptotic process IEA
 biological_processGO:0090090 negative regulation of canonical Wnt signaling pathway IDA
 biological_processGO:0097421 liver regeneration IEA
 biological_processGO:1903010 regulation of bone development IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0005930 axoneme IEA
 cellular_componentGO:0016592 mediator complex IDA
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0017053 transcriptional repressor complex IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0097542 ciliary tip TAS
 cellular_componentGO:0097546 ciliary base TAS
 molecular_functionGO:0000977 RNA polymerase II regulatory region sequence-specific DNA binding IDA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IC
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008013 beta-catenin binding IPI
 molecular_functionGO:0035035 histone acetyltransferase binding IPI
 molecular_functionGO:0042826 histone deacetylase binding IDA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
GLI3 is processed to GLI3R by the proteasome
Hedgehog off state
Hedgehog on state
GLI proteins bind promoters of Hh responsive genes to promote transcription
RUNX2 regulates osteoblast differentiation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000023 Inguinal hernia 
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000046 Scrotal hypoplasia 
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 HP:0000047 Hypospadias "Displacement of the urethral opening on the ventral (inferior) surface of the penis." [HPO:curators]
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 HP:0000054 Micropenis 
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 HP:0000062 Ambiguous genitalia 
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 HP:0000072 Hydroureter "The distention of the ureter with urine." [HPO:curators]
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 HP:0000086 Ectopic kidney "A developmental defect in which a kidney is located in an abnormal anatomic position." [HPO:curators]
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 HP:0000089 Renal hypoplasia 
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 HP:0000098 Increased body height 
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 HP:0000107 Renal cysts 
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 HP:0000110 Renal dysplasia 
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 HP:0000122 Unilateral renal agenesis 
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 HP:0000126 Hydronephrosis 
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 HP:0000171 Microglossia 
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000191 Oral frenula 
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 HP:0000193 Bifid uvula "A split or cleft uvula." [HPO:curators]
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 HP:0000204 Cleft lip "A gap in the `upper lip` (FMA:59817). This is a congenital defect resulting from nonfusion of tissues of the lip during embryonal development." [HPO:probinson]
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 HP:0000238 Hydrocephalus 
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 HP:0000243 Trigonocephaly 
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000260 Wide anterior fontanel "Enlargement of the anterior fontanelle with respect to age-dependent norms." [HPO:curators]
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 HP:0000269 Prominent occiput 
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 HP:0000270 Delayed closure of fontanelles "Infants normally have two fontanels at birth, the diamond-shaped anterior fontanelle at the junction of the coronal and sagittal sutures, and the posterior fontanelle at the intersection of the occipital and parietal bones. The posterior fontanelle usually closes by the 8th week of life, and the anterior fontanel closes by the 18th month of life on average. This term applies if there is delay of closure of the fontanelles beyond the normal age." [HPO:curators]
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 HP:0000273 Facial grimacing 
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 HP:0000308 Microretrognathia 
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 HP:0000316 Hypertelorism 
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 HP:0000340 Sloping forehead "A form of the forehead that slopes from top to bottom in an anterior direction." [HPO:curators]
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 HP:0000348 High forehead "An abnormally increased height of the forehead." [HPO:curators]
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 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
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 HP:0000363 Abnormality of ear lobes 
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 HP:0000368 Low-set, posteriorly rotated ears 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000413 External auditory canal atresia "Absence or failure to form of the external auditory canal." [HPO:curators]
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000453 Choanal atresia "Absence or abnormal closure of the choana (the posterior nasal aperture)." [HPO:curators]
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 HP:0000457 Flat nose 
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000506 Telecanthus "An abnormally increased distance between the medial canthi (angle between eyelids) of the eyelids." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000568 Microphthalmos "A developmental anomaly characterized by abnormal smallness of one or both eyes." [HPO:curators]
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 HP:0000695 Neonatal teeth 
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 HP:0000749 Paroxysmal bursts of laughter 
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 HP:0000776 Diaphragmatic hernia "Diaphragmatic hernia is the result of a developmental defect causing an abnormal opening in the diaphragm, through which abdominal organs (stomach, spleen, liver, and intestines) can protrude into the thoracic cavity. This usually causes respiratory distress in the newborn period." [HPO:curators]
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 HP:0000824 Growth hormone deficiency "Insufficient production of growth hormone, which is produced by the anterior pituitary gland." [HPO:curators]
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 HP:0000826 Precocious puberty "The onset of secondary sexual characteristics before a normal age. Although it is difficult to define normal age ranges because of the marked variation with which puberty begins in normal children, precocious puberty can be defined as the onset of puberty before the age of 8 years in girls or 9 years in boys." [HPO:curators]
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 HP:0000835 Adrenal hypoplasia 
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 HP:0000871 Panhypopituitarism "A pituitary functional deficit affecting all the anterior pituitary hormones (growth hormone, thyroid-stimulating hormone, follicle-stimulating hormone, luteinizing hormone, adrenocorticotropic hormone, and prolactin)." [HPO:curators]
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 HP:0000889 Abnormality of the clavicles "Any abnormality of the clavicles (collar bones)." [HPO:curators]
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 HP:0000902 Rib fusion 
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 HP:0001007 Hirsutism "Abnormally increased hair growth." [HPO:curators]
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 HP:0001156 Brachydactyly 
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 HP:0001159 Syndactyly "Webbing or fusion of the fingers or toes, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers or toes in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0001162 Postaxial polydactyly (hands) "Supernumerary digits located at the ulnar side of the hand." [HPO:curators]
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 HP:0001177 Preaxial polydactyly (hands) "Supernumerary digits located at the radial side of the hand. Polydactyly (supernumerary digits) involving the thumb occurs in many distinct forms of high variability and severity. Ranging from fleshy nubbins over varying degrees of partial duplication/splitting to completely duplicated or even triplicated thumbs or preaxial (on the radial side of the hand) supernumerary digits." [HPO:curators]
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 HP:0001199 Triphalangeal thumb "In contrast to the metacarpals 2-5, the first metacarpal is embryologically of phalangeal origin. The thumb normally consists of the first metacarpal and a proximal and distal phalanx. All other digits have an additional middle phalanx. This term applies if the thumb has an accessory phalanx, leading to a digit like appearance of the thumb." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001273 Abnormality of the corpus callosum "Abnormality of the corpus callosum, which is a broad thick band of nerve fibers that connects the right and left cerebral hemispheres." [HPO:curators]
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001305 Dandy-Walker malformation "A congenital brain malformation typically characterized by incomplete formation of the cerebellar vermis, dilation of the fourth ventricle, and enlargement of the posterior fossa. In layman s terms, Dandy Walker malformation is a cyst in the cerebellum (typically symmetrical) that is involved with the fourth ventricle. This may interfere with the body s ability to drain cerebrospinal fluid from the brain, resulting in hydrocephalus. Dandy Walker cysts are formed during early embryonic development, while the brain forms. The cyst in the cerebellum typically has several blood vessels running through it connecting to the brain, thereby prohibiting surgical removal." [HPO:curators]
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001360 Holoprosencephaly "Holoprosencephaly is a structural anomaly of the brain in which the developing forebrain fails to divide into two separate hemispheres and ventricles." [gc:hpe]
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 HP:0001363 Craniosynostosis "Craniosynostosis refers to the premature closure of the cranial sutures. Primary craniosynostosis refers to the closure of one or more sutures due to abnormalities in skull development, and secondary craniosynostosis results from failure of brain growth." [HPO:curators]
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 HP:0001459 1-3 toe syndactyly "`Syndactyly` (HP:0001159) with fusion of toes one to three." [HPO:sdoelken]
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001520 Large for gestational age "The term large for gestational age applies to babies whose birth weight lies above the 90th percentile for that gestational age." [HPO:curators]
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 HP:0001537 Umbilical hernia "Protrusion of abdominal contents through a defect in the abdominal wall musculature around the umbilicus. Skin and subcutaneous tissue overlie the defect." [HPO:curators]
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 HP:0001562 Oligohydramnios 
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 HP:0001627 Cardiac abnormality "An abnormality of the `heart` (FMA:7088)." [HPO:probinson]
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
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 HP:0001643 Patent ductus arteriosus 
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 HP:0001680 Coarctation of aorta "Coarctation of the aorta is a narrowing or constriction of the aorta just distal to the origin of the left subclavian artery." [HPO:curators]
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 HP:0001770 Toe syndactyly "Webbing or fusion of the toes, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the toes in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0001830 Postaxial polydactyly (feet) "Polydactyly of the foot most commonly refers to the presence of six toes on one foot. Postaxial polydactyly affects the lateral ray and the duplication may range from a well-formed articulated digit to a rudimentary digit." [HPO:curators]
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 HP:0001836 Camptodactyly (feet) 
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 HP:0001837 Broad toes 
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 HP:0001841 Preaxial polydactyly (feet) "This term applies for a wide variety of partial and/or complete duplications of the phalanges of the big toe (sometimes including the 1st metatarsal). A partial duplication can present itself on x-rays as a notched phalanx, bifid phalanx or a broadened phalanx. Polydactyly affecting the big toe is called preaxial or hallucal polydactyly of the feet." [HPO:curators]
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 HP:0001845 Overriding toes "A congenital condition in which a toe is adducted, dorsifelxed, and medially deviated, generally lying over the metatarsal phalangeal joint of the adjacent toe. Usually, the fifth toe is affected." [HPO:curators]
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 HP:0001883 Talipes 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002023 Anal atresia "Congenital absence of the anus, i.e., the opening at the bottom end of the intestinal tract." [HPO:curators]
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 HP:0002032 Esophageal atresia "A developmental defect resulting in complete obliteration of the lumen of the esophagus such that the esophagus ends in a blind pouch rather than connecting to the stomach." [HPO:curators]
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 HP:0002093 Respiratory insufficiency 
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 HP:0002101 Abnormal lung lobation "Defects in the formation of pulmonary lobules." [HPO:curators]
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 HP:0002139 Arrhinencephaly 
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 HP:0002164 Nail dysplasia 
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 HP:0002444 Hypothalamic hamartoma "Hypothalamic hamartoma is a malformation, not a tumor. Hypothalamic hamartomas grow at the rate of, or slower than, the surrounding brain tissue. A hamartoma of the hypothalamus appears as a non-enhancing mass in the floor of the third ventricle posterior to the optic chiasm that is isointense to grey matter on T1 and T2 pulse sequences of an MRI, but may have distinct intensity on FLAIR (neither cranial CT examination nor cranial ultrasound examination is adequate for diagnosis of hypothalamic hamartom). Individuals with hypothalamic hamartomas may have neurologic symptoms, although most are asymptomatic. Removal of the hypothalamic hamartoma is not indicated and often results in iatrogenic pituitary insufficiency." [HPO:curators]
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 HP:0002575 Tracheoesophageal fistula "An abnormal connection (fistula) between the esophagus and the trachea." [HPO:curators]
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 HP:0002652 Skeletal dysplasia 
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 HP:0002827 Dislocated hips 
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 HP:0002937 Hemivertebrae 
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 HP:0002986 Radial bowing 
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 HP:0003027 Mesomelia "Shortening of the middle parts of the limbs (forearm and lower leg) in relation to the upper and terminal segments." [HPO:sdoelken]
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 HP:0003048 Radial head subluxation "Partial dislocation of the head of the radius." [HPO:curators]
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 HP:0003074 Hyperglycemia 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003811 Neonatal death 
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 HP:0003828 Variable expressivity 
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 HP:0004303 Abnormality of muscle fibers "Abnormality of muscle fibers, which are cylindrical and multinucleated cells. Muscle fibers are subdivided into two types. Type I fibers are fatigue-resistant and rich in oxidative enzymes (they stain light with the myosin ATPase reaction), and type II fibers are fast-contracting, fatigue-prone, and rich in glycolytic enzymes (these fibers stain darkly). Normal muscle tissue has a random distribution of type I and type II fibers." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005151 Proximal aortic coarctation 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005349 Hypoplasia of the epiglottis 
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 HP:0005616 Accelerated skeletal maturation "An abnormally increased rate of skeletal maturation. Accelerated skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0005684 Distal arthrogryposis 
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 HP:0005688 Dysplastic distal thumb phalanges with a central hole 
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 HP:0005917 Supernumerary metacarpal bones "The presence of more than the normal number of metacarpal bones." [HPO:curators]
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 HP:0005990 Hypoplastic thyroid 
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 HP:0006042 Y-shaped metacarpals "Y-shaped metacarpals are the result of a partial fusion of two metacarpal bones, with the two arms of the Y pointing in the distal direction. Y-shaped metacarpals may be seen in combination with polydactyly." [HPO:curators]
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 HP:0006097 3-4 finger syndactyly "`Syndactyly` (HP:0001159) with fusion of fingers three and four." [HPO:sdoelken]
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 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0006136 Bilateral postaxial polydactyly 
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 HP:0006159 Central polydactyly (hands) 
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 HP:0006402 Distal shortening of limbs 
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 HP:0006695 Tricuspid and mitral valves are replaced by a single inlet valve 
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 HP:0007360 Aplasia/Hypoplasia of the cerebellum 
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 HP:0007370 Aplasia/Hypoplasia of the corpus callosum "Absence or underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0007601 Midline facial capillary hemangioma 
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 HP:0008163 Plasma cortisol low 
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 HP:0008188 Thyroid dysplasia/aplasia 
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 HP:0008207 Primary adrenal insufficiency 
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 HP:0008213 Pituitary gonadotropin deficiency 
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 HP:0008240 Secondary growth hormone deficiency 
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 HP:0008245 Tsh deficient hypothyroidism 
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 HP:0008551 Underdeveloped ears 
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 HP:0008684 Absent/hypoplastic uterus 
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 HP:0008706 Distal urethral duplication 
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 HP:0008734 Decreased testicular size 
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 HP:0008751 Laryngeal cleft 
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 HP:0009473 Joint contractures involving the joints of the hand 
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 HP:0009958 Polydactyly affecting the 3rd finger 
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 HP:0009971 Polydactyly affecting the 4th finger 
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 HP:0010044 Hypoplastic/short 4th metacarpal 
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 HP:0010055 Broad hallux 
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 HP:0010059 Broad phalanges of the hallux 
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 HP:0010112 Central polydactyly (feet) 
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 HP:0010564 Bifid epiglottis "A midline anterior-posterior cleft of the epiglottis that involves at least two-thirds of the epiglottic leaf. It is a useful feature for clinical diagnosis because it appears to be very rare in syndromes other than Pallister-Hall-Syndrome and is also rare as an isolated malformation." [HPO:curators]
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 HP:0010713 1-5 toe syndactyly "`Syndactyly` (HP:0001159) with fusion of toes one to five (complete syndactyly of all toes of the foot)." [HPO:sdoelken]
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 HP:0010821 Gelastic seizures "A type of `seizure` (HP:0001250) characterized by laughing or an outburst of laughing as a major feature." [HPO:probinson]
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0010958 Bilateral renal agenesis "A `bilateral` (PATO:0000618) form of `agenesis` (MPATH:57) of the `kidney` (FMA:7203)." [HPO:probinson]
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 HP:0011026 Aplasia/Hypoplasia of the vagina "`Aplasia` (MPATH:58) or developmental hypoplasia of the `vagina` (FMA:19949)." [HPO:probinson]
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 HP:0011304 Broad thumb "Increased thumb width without increased dorso-ventral dimension." [pmid:19125433]
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 HP:0011330 Metopic synostosis "Premature fusion of the metopic suture." [DDD:awilkie]
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 HP:0011734 Central adrenal insufficiency "A form of adrenal insufficiency related to a lack of ACTH, which leads to a decrease in the production of cortisol by the adrenal glands. Aldosterone production is not usually affected." [DDD:spark]
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 HP:0011748 Adrenocorticotropic hormone deficiency "A reduced ability to secrete adrenocorticotropic hormone (ACTH), a hormone that stimulates the adrenal cortex to secrete of glucocorticoids such as cortisol." [DDD:spark]
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 HP:0011939 3-4 finger cutaneous syndactyly "A soft tissue continuity in the A/P axis between fingers 4 and 4." [HPO:probinson]
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 HP:0012165 Oligodactyly "A developmental defect resulting in the presence of fewer than the normal number of digits." [HPO:probinson]
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 HP:0012751 Abnormal basal ganglia MRI signal intensity "A deviation from normal signal on magnetic resonance imaging (MRI) of the basal ganglia." [UToronto:htrang]
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 HP:0030010 Hydrometrocolpos "Hydrometrocolpos is an accumulation of uterine and vaginal secretions as well as menstrual blood in the uterus and vagina." []
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 HP:0030021 Auricular tag "Small protrusion within the pinna." [eom:1b6d89bad30b8f18, pmid:19152421]
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 HP:0030431 Osteochondroma "A cartilage capped bony outgrowth of a long bone. Osteochondroma arises on the external surface of bone containing a marrow cavity that is continuous with that of the underlying bone." [HPO:probinson, pmid:18271966]
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 HP:0030799 Scaphocephaly "Scaphocephaly is a subtype of dolichocephaly where the anterior and posterior aspects of the cranial vault are pointed (boat-shaped). Scaphocephaly is caused by a precocious fusion of sagittal suture without other associated synostosis." [HPO:probinson, PMID:16156241, PMID:23960302]
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 HP:0040086 Abnormal prolactin level 
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 HP:0100258 Preaxial polydactyly "A form of polydactyly in which the extra digit or digits are localized on the side of the thumb or great toe." [HPO:probinson]
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 HP:0200117 Recurrent upper and lower respiratory tract infections 
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 HP:0410030 Cleft lip "A gap in the lip or lips." []
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000100387 RBX1 / P62877 / ring-box 1  / complex / reaction
 ENSG00000082701 GSK3B / P49841 / glycogen synthase kinase 3 beta  / reaction
 ENSG00000036257 CUL3 / Q13618 / cullin 3  / complex / reaction
 ENSG00000113712 P48729 / CSNK1A1 / casein kinase 1 alpha 1  / reaction
 ENSG00000072062 P17612 / PRKACA / protein kinase cAMP-activated catalytic subunit alpha  / reaction
 ENSG00000121067 SPOP / O43791 / speckle type BTB/POZ protein  / complex / reaction
 ENSG00000107882 SUFU / Q9UMX1 / SUFU negative regulator of hedgehog signaling  / reaction / complex
 ENSG00000142875 P22694 / PRKACB / protein kinase cAMP-activated catalytic subunit beta  / reaction
 ENSG00000134371 CDC73 / Q6P1J9 / cell division cycle 73  / complex / reaction
 ENSG00000165059 P22612 / PRKACG / protein kinase cAMP-activated catalytic subunit gamma  / reaction
 ENSG00000124813 RUNX2 / Q13950 / runt related transcription factor 2  / reaction / complex
 ENSG00000140474 ULK3 / Q6PHR2 / unc-51 like kinase 3  / reaction






 

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