ENSG00000135424


Homo sapiens

Features
Gene ID: ENSG00000135424
  
Biological name :ITGA7
  
Synonyms : integrin subunit alpha 7 / ITGA7 / Q13683
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q13.2
Gene start: 55684568
Gene end: 55716043
  
Corresponding Affymetrix probe sets: 209663_s_at (Human Genome U133 Plus 2.0 Array)   216331_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000452467
Ensembl peptide - ENSP00000452120
Ensembl peptide - ENSP00000452387
Ensembl peptide - ENSP00000257879
Ensembl peptide - ENSP00000343009
Ensembl peptide - ENSP00000393844
Ensembl peptide - ENSP00000450578
Ensembl peptide - ENSP00000450679
Ensembl peptide - ENSP00000450693
Ensembl peptide - ENSP00000450798
Ensembl peptide - ENSP00000451039
Ensembl peptide - ENSP00000451311
Ensembl peptide - ENSP00000452043
NCBI entrez gene - 3679     See in Manteia.
OMIM - 600536
RefSeq - XM_017019265
RefSeq - NM_001144996
RefSeq - NM_001144997
RefSeq - NM_002206
RefSeq - XM_005268839
RefSeq - XM_005268840
RefSeq - XM_005268841
RefSeq - XM_005268842
RefSeq - XM_005268844
RefSeq - XM_005268846
RefSeq - XM_005268848
RefSeq - XM_005268849
RefSeq - XM_005268850
RefSeq Peptide - NP_002197
RefSeq Peptide - NP_001138468
RefSeq Peptide - NP_001138469
swissprot - H0YJ26
swissprot - H0YJ98
swissprot - H0YJS5
swissprot - G3V2I4
swissprot - Q13683
swissprot - G3V2C6
swissprot - J3KNV4
swissprot - G3V2Q6
swissprot - G3V3L8
Ensembl - ENSG00000135424
  
Related genetic diseases (OMIM): 613204 - Muscular dystrophy, congenital, due to ITGA7 deficiency, 613204
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Itga7ENSMUSG00000025348Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ITGA6 / P23229 / integrin subunit alpha 6ENSG0000009140946
ITGA3 / P26006 / integrin subunit alpha 3ENSG0000000588435
ITGAV / P06756 / integrin subunit alpha VENSG0000013844827
ITGA5 / P08648 / integrin subunit alpha 5ENSG0000016163826
ITGA8 / P53708 / integrin subunit alpha 8ENSG0000007794326
ITGA2B / P08514 / integrin subunit alpha 2bENSG0000000596125
ITGA9 / Q13797 / integrin subunit alpha 9ENSG0000014466824
ITGA4 / P13612 / integrin subunit alpha 4ENSG0000011523222
ITGA1 / P56199 / integrin subunit alpha 1ENSG0000021394922
ITGA10 / O75578 / integrin subunit alpha 10ENSG0000014312721
ITGA2 / P17301 / integrin subunit alpha 2ENSG0000016417120
ITGA11 / Q9UKX5 / integrin subunit alpha 11ENSG0000013780920
ITGAX / P20702 / integrin subunit alpha XENSG0000014067820
ITGAD / Q13349 / integrin subunit alpha DENSG0000015688619
ITGAL / P20701 / integrin subunit alpha LENSG0000000584419
ITGAM / P11215 / integrin subunit alpha MENSG0000016989619
ITGAE / P38570 / integrin subunit alpha EENSG0000008345718


Protein motifs (from Interpro)
Interpro ID Name
 IPR000413  Integrin alpha chain
 IPR013517  FG-GAP repeat
 IPR013519  Integrin alpha beta-propellor
 IPR013649  Integrin alpha-2
 IPR018184  Integrin alpha chain, C-terminal cytoplasmic region, conserved site
 IPR032695  Integrin domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007160 cell-matrix adhesion TAS
 biological_processGO:0007229 integrin-mediated signaling pathway IEA
 biological_processGO:0007517 muscle organ development TAS
 biological_processGO:0008360 regulation of cell shape IEA
 biological_processGO:0030198 extracellular matrix organization TAS
 biological_processGO:0034113 heterotypic cell-cell adhesion IMP
 biological_processGO:0035987 endodermal cell differentiation IEP
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0008305 integrin complex IEA
 cellular_componentGO:0009986 cell surface IC
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Integrin cell surface interactions
Laminin interactions
ECM proteoglycans


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000767 Pectus excavatum "A defect of the chest wall characterized by a depression of the sternum, giving the chest ("pectus") a caved-in ("excavatum") appearance." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001270 Motor retardation 
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 HP:0001315 Reduced reflexes 
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0003198 Myopathy 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003557 Increased variability in muscle fiber size "An abnormally high degree of muscle fiber size variation. This phenotypic feature can be observed upon muscle biopsy." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0003741 Congenital muscular dystrophy 
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 HP:0008947 Infantile muscular hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in infancy." [HPO:curators]
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 HP:0012548 Skeletal muscle fatty infiltration "Deposition of fat within muscles." [HPO:probinson]
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 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000150093 ITGB1 / P05556 / integrin subunit beta 1  / complex






 

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