ENSG00000077943


Homo sapiens

Features
Gene ID: ENSG00000077943
  
Biological name :ITGA8
  
Synonyms : integrin subunit alpha 8 / ITGA8 / P53708
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: -1
Band: p13
Gene start: 15513949
Gene end: 15720125
  
Corresponding Affymetrix probe sets: 214265_at (Human Genome U133 Plus 2.0 Array)   235666_at (Human Genome U133 Plus 2.0 Array)   239092_at (Human Genome U133 Plus 2.0 Array)   242071_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000367316
NCBI entrez gene - 8516     See in Manteia.
OMIM - 604063
RefSeq - XM_011519752
RefSeq - NM_001291494
RefSeq - NM_003638
RefSeq Peptide - NP_003629
RefSeq Peptide - NP_001278423
swissprot - P53708
Ensembl - ENSG00000077943
  
Related genetic diseases (OMIM): 191830 - Renal hypodysplasia/aplasia 1, 191830
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 itga8ENSDARG00000078717Danio rerio
 ITGA8ENSGALG00000008747Gallus gallus
 Itga8ENSMUSG00000026768Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ITGAV / P06756 / integrin subunit alpha VENSG0000013844847
ITGA5 / P08648 / integrin subunit alpha 5ENSG0000016163845
ITGA2B / P08514 / integrin subunit alpha 2bENSG0000000596140
ITGA6 / P23229 / integrin subunit alpha 6ENSG0000009140928
ITGA7 / Q13683 / integrin subunit alpha 7ENSG0000013542428
ITGA9 / Q13797 / integrin subunit alpha 9ENSG0000014466825
ITGA3 / P26006 / integrin subunit alpha 3ENSG0000000588425
ITGA4 / P13612 / integrin subunit alpha 4ENSG0000011523224
ITGA2 / P17301 / integrin subunit alpha 2ENSG0000016417123
ITGAL / P20701 / integrin subunit alpha LENSG0000000584421
ITGA10 / O75578 / integrin subunit alpha 10ENSG0000014312721
ITGA11 / Q9UKX5 / integrin subunit alpha 11ENSG0000013780921
ITGA1 / P56199 / integrin subunit alpha 1ENSG0000021394921
ITGAX / P20702 / integrin subunit alpha XENSG0000014067820
ITGAD / Q13349 / integrin subunit alpha DENSG0000015688620
ITGAE / P38570 / integrin subunit alpha EENSG0000008345719
ITGAM / P11215 / integrin subunit alpha MENSG0000016989619


Protein motifs (from Interpro)
Interpro ID Name
 IPR000413  Integrin alpha chain
 IPR013517  FG-GAP repeat
 IPR013519  Integrin alpha beta-propellor
 IPR013649  Integrin alpha-2
 IPR018184  Integrin alpha chain, C-terminal cytoplasmic region, conserved site
 IPR032695  Integrin domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001656 metanephros development IEA
 biological_processGO:0001822 kidney development IMP
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007160 cell-matrix adhesion NAS
 biological_processGO:0007229 integrin-mediated signaling pathway IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0007420 brain development IEA
 biological_processGO:0007613 memory IEA
 biological_processGO:0030030 cell projection organization IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030198 extracellular matrix organization IEA
 biological_processGO:0030511 positive regulation of transforming growth factor beta receptor signaling pathway IEA
 biological_processGO:0034446 substrate adhesion-dependent cell spreading IMP
 biological_processGO:0042472 inner ear morphogenesis IEA
 biological_processGO:0045184 establishment of protein localization IEA
 biological_processGO:0048333 mesodermal cell differentiation IEP
 biological_processGO:0048745 smooth muscle tissue development IEA
 biological_processGO:0098609 cell-cell adhesion NAS
 biological_processGO:2000721 positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation IEA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005925 focal adhesion HDA
 cellular_componentGO:0008305 integrin complex TAS
 cellular_componentGO:0009986 cell surface IDA
 cellular_componentGO:0014069 postsynaptic density IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0032591 dendritic spine membrane IEA
 cellular_componentGO:0034678 integrin alpha8-beta1 complex TAS
 cellular_componentGO:0043204 perikaryon IEA
 cellular_componentGO:0045177 apical part of cell IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Molecules associated with elastic fibres
Integrin cell surface interactions
ECM proteoglycans


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000008 Abnormality of female internal genitalia 
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 HP:0000093 Proteinuria 
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 HP:0000104 Renal agenesis 
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 HP:0000110 Renal dysplasia 
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 HP:0000148 Vaginal atresia 
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000278 Retrognathia 
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000457 Flat nose 
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 HP:0000786 Primary amenorrhea 
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 HP:0000813 Bicornuate uterus 
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 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
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 HP:0001562 Oligohydramnios 
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 HP:0001563 Fetal polyuria 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0001958 Nonketotic hypoglycemia 
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 HP:0002009 Potter facies 
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 HP:0002089 Pulmonary hypoplasia 
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 HP:0002242 Abnormality of the intestines 
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 HP:0002575 Tracheoesophageal fistula "An abnormal connection (fistula) between the esophagus and the trachea." [HPO:curators]
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 HP:0003577 Onset at birth 
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 HP:0005107 Abnormality of the sacrum 
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 HP:0010497 Sirenomelia "A developmental defect in which the legs are fused together." [HPO:curators]
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 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
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 HP:0100335 Non-midline cleft lip 
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 HP:0100589 Urogenital fistula "The presence of a `fistula` (MPATH:70) affecting the `genitourinary system` (FMA:280610)." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000118785 SPP1 / P10451 / secreted phosphoprotein 1  / reaction / complex
 ENSG00000041982 TNC / P24821 / tenascin C  / reaction / complex
 ENSG00000150093 ITGB1 / P05556 / integrin subunit beta 1  / complex






 

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