ENSG00000005884


Homo sapiens

Features
Gene ID: ENSG00000005884
  
Biological name :ITGA3
  
Synonyms : integrin subunit alpha 3 / ITGA3 / P26006
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: q21.33
Gene start: 50055968
Gene end: 50090481
  
Corresponding Affymetrix probe sets: 201474_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000425980
Ensembl peptide - ENSP00000467851
Ensembl peptide - ENSP00000466652
Ensembl peptide - ENSP00000426142
Ensembl peptide - ENSP00000007722
Ensembl peptide - ENSP00000315190
Ensembl peptide - ENSP00000422826
NCBI entrez gene - 3675     See in Manteia.
OMIM - 605025
RefSeq - NM_002204
RefSeq - XM_005257308
RefSeq Peptide - NP_002195
swissprot - D6R9X8
swissprot - K7EQJ2
swissprot - P26006
swissprot - K7EMU3
swissprot - A0A140VJM0
swissprot - H0YA32
swissprot - H0YA49
Ensembl - ENSG00000005884
  
Related genetic diseases (OMIM): 614748 - Interstitial lung disease, nephrotic syndrome, and epidermolysis bullosa, congenital, 614748
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 itga3aENSDARG00000037917Danio rerio
 itga3bENSDARG00000012824Danio rerio
 ITGA3ENSGALG00000032702Gallus gallus
 Itga3ENSMUSG00000001507Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ITGA7 / Q13683 / integrin subunit alpha 7ENSG0000013542438
ITGA6 / P23229 / integrin subunit alpha 6ENSG0000009140937
ITGA2B / P08514 / integrin subunit alpha 2bENSG0000000596126
ITGAV / P06756 / integrin subunit alpha VENSG0000013844825
ITGA5 / P08648 / integrin subunit alpha 5ENSG0000016163825
ITGA8 / P53708 / integrin subunit alpha 8ENSG0000007794325
ITGA4 / P13612 / integrin subunit alpha 4ENSG0000011523223
ITGA9 / Q13797 / integrin subunit alpha 9ENSG0000014466823
ITGA10 / O75578 / integrin subunit alpha 10ENSG0000014312722
ITGA11 / Q9UKX5 / integrin subunit alpha 11ENSG0000013780921
ITGAX / P20702 / integrin subunit alpha XENSG0000014067821
ITGAL / P20701 / integrin subunit alpha LENSG0000000584421
ITGA1 / P56199 / integrin subunit alpha 1ENSG0000021394921
ITGAE / P38570 / integrin subunit alpha EENSG0000008345720
ITGA2 / P17301 / integrin subunit alpha 2ENSG0000016417120
ITGAD / Q13349 / integrin subunit alpha DENSG0000015688620
ITGAM / P11215 / integrin subunit alpha MENSG0000016989620


Protein motifs (from Interpro)
Interpro ID Name
 IPR000413  Integrin alpha chain
 IPR013517  FG-GAP repeat
 IPR013519  Integrin alpha beta-propellor
 IPR013649  Integrin alpha-2
 IPR018184  Integrin alpha chain, C-terminal cytoplasmic region, conserved site
 IPR032695  Integrin domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001764 neuron migration IEA
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007160 cell-matrix adhesion TAS
 biological_processGO:0007229 integrin-mediated signaling pathway IEA
 biological_processGO:0007507 heart development IEA
 biological_processGO:0007613 memory IEA
 biological_processGO:0010628 positive regulation of gene expression IEA
 biological_processGO:0010634 positive regulation of epithelial cell migration IEA
 biological_processGO:0010811 positive regulation of cell-substrate adhesion IEA
 biological_processGO:0010976 positive regulation of neuron projection development IEA
 biological_processGO:0017015 regulation of transforming growth factor beta receptor signaling pathway IMP
 biological_processGO:0030111 regulation of Wnt signaling pathway IMP
 biological_processGO:0030198 extracellular matrix organization TAS
 biological_processGO:0030324 lung development IMP
 biological_processGO:0030510 regulation of BMP signaling pathway IMP
 biological_processGO:0031345 negative regulation of cell projection organization IEA
 biological_processGO:0034698 response to gonadotropin IEA
 biological_processGO:0035024 negative regulation of Rho protein signal transduction IEA
 biological_processGO:0035640 exploration behavior IEA
 biological_processGO:0042493 response to drug IEA
 biological_processGO:0043588 skin development IMP
 biological_processGO:0048333 mesodermal cell differentiation IEP
 biological_processGO:0050900 leukocyte migration TAS
 biological_processGO:0060135 maternal process involved in female pregnancy IEA
 biological_processGO:0072006 nephron development IMP
 biological_processGO:0097062 dendritic spine maintenance IEA
 biological_processGO:0097205 renal filtration IMP
 biological_processGO:1903078 positive regulation of protein localization to plasma membrane IDA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0005925 focal adhesion HDA
 cellular_componentGO:0008305 integrin complex IEA
 cellular_componentGO:0009897 external side of plasma membrane IEA
 cellular_componentGO:0009986 cell surface HDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016323 basolateral plasma membrane IEA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030426 growth cone IEA
 cellular_componentGO:0031527 filopodium membrane IEA
 cellular_componentGO:0034667 integrin alpha3-beta1 complex IMP
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043235 receptor complex IDA
 cellular_componentGO:0045202 synapse IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0060076 excitatory synapse IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0071438 invadopodium membrane IEA
 cellular_componentGO:0071944 cell periphery IDA
 cellular_componentGO:0097060 synaptic membrane IEA
 molecular_functionGO:0001968 fibronectin binding IEA
 molecular_functionGO:0002020 protease binding IPI
 molecular_functionGO:0005178 integrin binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005518 collagen binding IEA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0043236 laminin binding IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IDA


Pathways (from Reactome)
Pathway description
Basigin interactions
Integrin cell surface interactions
Laminin interactions
MET activates PTK2 signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000083 Renal failure 
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 HP:0000092 Tubular atrophy 
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 HP:0000093 Proteinuria 
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 HP:0000097 Focal segmental glomerulosclerosis 
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 HP:0000100 Nephrotic syndrome 
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 HP:0000160 Microstomia "The presence of an abnormally small `mouth` (FMA:49184)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000311 Round face "An unusually round appearance of the face." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000400 Large ears 
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 HP:0000535 Sparse eyebrows 
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 HP:0000653 Sparse eyelashes "Decreased density/number of eyelashes." [pmid:19125427]
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 HP:0000771 Gynecomastia 
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 HP:0000774 Narrow chest 
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 HP:0001030 Fragile skin 
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 HP:0002098 Respiratory distress 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002209 Sparse scalp hair "Sparseness of the `head hair` (FMA:54241)." [HPO:probinson]
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 HP:0002213 Fine hair 
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 HP:0002643 Neonatal respiratory distress 
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 HP:0003073 Hypoalbuminemia "Reduction in the concentration of albumin in the blood." [HPO:curators]
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 HP:0003812 Phenotypic variability 
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 HP:0005972 Respiratory acidosis 
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 HP:0006530 Interstitial pulmonary disease 
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 HP:0008066 Abnormal blistering of the skin 
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 HP:0008404 Nail dystrophy, variable 
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0012213 Decreased glomerular filtration rate "An abnormal reduction in the volume of water filtered out of plasma through glomerular capillary walls into Bowman s capsules per unit of time." [HP:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000172037 LAMB2 / P55268 / laminin subunit beta 2  / reaction / complex
 ENSG00000053747 LAMA3 / Q16787 / laminin subunit alpha 3  / reaction / complex
 ENSG00000091136 LAMB1 / P07942 / laminin subunit beta 1  / reaction / complex
 ENSG00000058085 LAMC2 / Q13753 / laminin subunit gamma 2  / complex / reaction
 ENSG00000135862 LAMC1 / P11047 / laminin subunit gamma 1  / reaction / complex
 ENSG00000172270 BSG / P35613 / basigin (Ok blood group)  / reaction / complex
 ENSG00000196878 LAMB3 / Q13751 / laminin subunit beta 3  / reaction / complex
 ENSG00000130702 LAMA5 / O15230 / laminin subunit alpha 5  / complex / reaction
 ENSG00000137801 THBS1 / P07996 / thrombospondin 1  / reaction / complex
 ENSG00000150093 ITGB1 / P05556 / integrin subunit beta 1  / complex






 

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