ENSG00000163823


Homo sapiens

Features
Gene ID: ENSG00000163823
  
Biological name :CCR1
  
Synonyms : C-C motif chemokine receptor 1 / CCR1 / P32246
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: -1
Band: p21.31
Gene start: 46201709
Gene end: 46208396
  
Corresponding Affymetrix probe sets: 205098_at (Human Genome U133 Plus 2.0 Array)   205099_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000296140
NCBI entrez gene - 1230     See in Manteia.
OMIM - 601159
RefSeq - NM_001295
RefSeq Peptide - NP_001286
swissprot - P32246
swissprot - Q5U003
Ensembl - ENSG00000163823
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ccr11.1ENSDARG00000070755Danio rerio
 ccr2ENSDARG00000105363Danio rerio
 ccr2ENSDARG00000079829Danio rerio
 CCR2ENSGALG00000011733Gallus gallus
 CCR5ENSGALG00000037077Gallus gallus
 Ccr1ENSMUSG00000025804Mus musculus
 Ccr1l1ENSMUSG00000064039Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CCR3 / P51677 / C-C motif chemokine receptor 3ENSG0000018362563
CCR5 / P51681 / C-C motif chemokine receptor 5 (gene/pseudogene)ENSG0000016079155
CCR2 / P41597 / C-C motif chemokine receptor 2ENSG0000012180752
CCR4 / P51679 / C-C motif chemokine receptor 4ENSG0000018381347
CX3CR1 / P49238 / C-X3-C motif chemokine receptor 1ENSG0000016832940
CCR8 / P51685 / C-C motif chemokine receptor 8ENSG0000017993439
ACKR2 / O00590 / atypical chemokine receptor 2ENSG0000014464837
CCR7 / P32248 / C-C motif chemokine receptor 7ENSG0000012635335
CCR9 / P51686 / C-C motif chemokine receptor 9ENSG0000017358534
XCR1 / P46094 / X-C motif chemokine receptor 1ENSG0000017357832
CCR6 / P51684 / C-C motif chemokine receptor 6ENSG0000011248631
CXCR3 / P49682 / C-X-C motif chemokine receptor 3ENSG0000018681030
ACKR4 / Q9NPB9 / atypical chemokine receptor 4ENSG0000012904830
CXCR2 / P25025 / C-X-C motif chemokine receptor 2ENSG0000018087130
CXCR4 / P61073 / C-X-C motif chemokine receptor 4ENSG0000012196630
CCR10 / P46092 / C-C motif chemokine receptor 10ENSG0000018445130
CXCR6 / O00574 / C-X-C motif chemokine receptor 6ENSG0000017221529
CXCR1 / P25024 / C-X-C motif chemokine receptor 1ENSG0000016346428
CXCR5 / P32302 / C-X-C motif chemokine receptor 5ENSG0000016068327


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR000355  Chemokine receptor family
 IPR002236  CC chemokine receptor 1
 IPR017452  GPCR, rhodopsin-like, 7TM
 IPR034321  C-C Chemokine receptor type 1, eukaryote


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002407 dendritic cell chemotaxis TAS
 biological_processGO:0006816 calcium ion transport IDA
 biological_processGO:0006874 cellular calcium ion homeostasis IDA
 biological_processGO:0006887 exocytosis IDA
 biological_processGO:0006935 chemotaxis NAS
 biological_processGO:0006954 inflammatory response TAS
 biological_processGO:0006955 immune response IDA
 biological_processGO:0007155 cell adhesion TAS
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007166 cell surface receptor signaling pathway TAS
 biological_processGO:0007186 G-protein coupled receptor signaling pathway TAS
 biological_processGO:0007187 G-protein coupled receptor signaling pathway, coupled to cyclic nucleotide second messenger TAS
 biological_processGO:0007204 positive regulation of cytosolic calcium ion concentration IDA
 biological_processGO:0007267 cell-cell signaling IDA
 biological_processGO:0009611 response to wounding TAS
 biological_processGO:0010629 negative regulation of gene expression IMP
 biological_processGO:0019221 cytokine-mediated signaling pathway NAS
 biological_processGO:0030335 positive regulation of cell migration IMP
 biological_processGO:0030502 negative regulation of bone mineralization IMP
 biological_processGO:0045672 positive regulation of osteoclast differentiation IMP
 biological_processGO:0051928 positive regulation of calcium ion transport IDA
 biological_processGO:0070098 chemokine-mediated signaling pathway IDA
 biological_processGO:0070374 positive regulation of ERK1 and ERK2 cascade IMP
 biological_processGO:0090026 positive regulation of monocyte chemotaxis IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0009897 external side of plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004435 phosphatidylinositol phospholipase C activity IDA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0004950 chemokine receptor activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016493 C-C chemokine receptor activity IDA
 molecular_functionGO:0019957 C-C chemokine binding IPI
 molecular_functionGO:0035717 chemokine (C-C motif) ligand 7 binding IPI
 molecular_functionGO:0071791 chemokine (C-C motif) ligand 5 binding IPI


Pathways (from Reactome)
Pathway description
Chemokine receptors bind chemokines
G alpha (i) signalling events
Interleukin-10 signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000083 Renal failure 
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 HP:0000155 Oral ulcers 
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 HP:0000488 Retinopathy 
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000613 Photophobia "Excessive sensitivity to light with the sensation of discomfort or pain in the eyes due to exposure to bright light." [HPO:curators]
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 HP:0000618 Blindness 
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 HP:0000737 Irritability 
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 HP:0001061 Acne 
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 HP:0001097 Keratoconjunctivitis sicca "Dryness of the eye related to deficiency of the tear film components (aqueous, mucin, or lipid), lid surface abnormalities, or epithelial abnormalities. Keratoconjunctivitis sicca often results in a scratchy or sandy sensation (foreign body sensation) in the eyes, and may also be associated with itching, inability to produce tears, photosensitivity, redness, pain, and difficulty in moving the eyelids." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001269 Hemiparesis "Relatively mild weakness in the arm, leg, and in some cases the face on one side of the body." [HPO:curators]
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 HP:0001287 Meningitis 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001289 Confusion "Lack of clarity and coherence of thought, perception, understanding, or action." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001369 Arthritis 
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 HP:0001482 Subcutaneous nodules 
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 HP:0001637 Abnormality of the myocardium 
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 HP:0001653 Mitral regurgitation "An `abnormality of the mitral valve` (HP:0001633) characterized by insufficiency or incompetence of the mitral valve resulting in retrograde leaking of blood through the mitral valve upon ventricular contraction." [HPO:probinson]
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 HP:0001658 Myocardial infarction 
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 HP:0001659 Aortic insufficiency "An insufficiency of the aortic valve, leading to regurgitation (backward flow) of blood from the aorta into the left ventricle." [HPO:curators]
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 HP:0001701 Pericarditis 
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 HP:0001733 Pancreatitis 
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001824 Weight loss 
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 HP:0001945 Fever 
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 HP:0002017 Nausea and vomiting 
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 HP:0002024 Malabsorption 
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 HP:0002027 Abdominal pain 
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 HP:0002039 Anorexia 
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 HP:0002076 Migraine 
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 HP:0002102 Pleuritis "Inflammation of the pleura." [HPO:sdoelken]
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 HP:0002105 Hemoptysis "Coughing up (expectoration) of blood or blood-streaked sputum from the larynx, trachea, bronchi, or lungs." [HPO:curators]
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 HP:0002113 Pulmonary infiltrates 
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 HP:0002202 Pleural effusion "The presence of an excessive amount of fluid in the pleural cavity." [HPO:curators]
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 HP:0002204 Pulmonary embolism 
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 HP:0002239 Gastrointestinal hemorrhage 
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 HP:0002321 Vertigo "An abnormal sensation of spinning while the body is actually stationary." [HPO:curators]
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 HP:0002354 Memory impairment 
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 HP:0002376 Developmental regression 
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 HP:0002383 Encephalitis 
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 HP:0002516 Increased intracranial pressure 
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 HP:0002633 Vasculitis 
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 HP:0002637 Cerebral ischemia 
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 HP:0002716 Lymphadenopathy 
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 HP:0002829 Arthralgia 
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 HP:0003326 Myalgia "A tendency to experience muscle pain." [HPO:curators]
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 HP:0003401 Paresthesia "Abnormal sensations such as tingling, pricking, or numbness of the skin with no apparent physical cause." [HPO:curators]
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 HP:0004420 Arterial thrombosis 
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 HP:0004936 Venous thrombosis 
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 HP:0006824 Cranial nerve paralysis 
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 HP:0007256 Mild pyramidal signs 
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 HP:0008066 Abnormal blistering of the skin 
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 HP:0010885 Aseptic necrosis "A disease where there is cellular death (necrosis) of bone components due to interruption of the blood supply." [HPO:sdoelken]
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 HP:0011107 Recurrent aphthous stomatitis "Recurrent episodes of ulceration of the oral mucosa." [HPO:probinson]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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 HP:0100326 Immunologic hypersensitivity 
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 HP:0100584 Endocarditis "An inflammation of the endocardium, the inner layer of the heart, which usually involves the heart valves." [HPO:sdoelken]
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 HP:0100614 Myositis "A general term for inflammation of the muscles without respect to the underlying cause." [HPO:sdoelken]
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 HP:0100654 Retrobulbar optic neuritis "`Optic neuritis`(HP:0100653) that occurs in the section of the optic nerve located behind the eyebal." [HPO:sdoelken]
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 HP:0100758 Gangrene "A serious and potentially life-threatening condition that arises when a considerable mass of body tissue dies (necrosis)." [ISBN:9780781770873]
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 HP:0100796 Orchitis "Testicular inflammation." [HPO:sdoelken]
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 HP:0100820 Glomerulopathy "Inflammatory or noninflammatory diseases affecting the glomeruli of the nephron." [HPO:sdoelken]
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 HP:0200034 skin papules "A circumscribed, solid elevation of skin with no visible fluid, varying in size from a pinhead to less than 10mm in diameter at the widest point." [HPO:SKOEHLER]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000275152 CCL16 / O15467 / C-C motif chemokine ligand 16  / complex / reaction
 ENSG00000275302 CCL4 / P13236 / C-C motif chemokine ligand 4  / complex






 

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