ENSG00000223802


Homo sapiens

Features
Gene ID: ENSG00000223802
  
Biological name :CERS1
  
Synonyms : ceramide synthase 1 / CERS1 / P27544
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: -1
Band: p13.11
Gene start: 18868545
Gene end: 18896727
  
Corresponding Affymetrix probe sets: 206397_x_at (Human Genome U133 Plus 2.0 Array)   229448_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000485582
Ensembl peptide - ENSP00000389044
Ensembl peptide - ENSP00000437648
Ensembl peptide - ENSP00000471428
Ensembl peptide - ENSP00000485308
NCBI entrez gene - 10715     See in Manteia.
NCBI entrez gene - 2657     See in Manteia.
OMIM - 602880
OMIM - 606919
RefSeq - NM_001492
RefSeq - NM_198207
RefSeq - NM_001290265
RefSeq - NM_021267
RefSeq Peptide - NP_001483
RefSeq Peptide - NP_937850
RefSeq Peptide - NP_001277194
RefSeq Peptide - NP_067090
swissprot - Q5XG75
swissprot - A0A024R7N8
swissprot - M0R0T2
swissprot - P27544
Ensembl - ENSG00000223802
  
Related genetic diseases (OMIM): 208530 - Right atrial isomerism (Ivemark), 208530
  613854 - Congenital heart defects, multiple types, 6, 613854
  616230 - ?Epilepsy, progressive myoclonic, 8, 616230
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gdf3ENSDARG00000037995Danio rerio
 GDF3ENSGALG00000003161Gallus gallus
 Cers1ENSMUSG00000087408Mus musculus
 Gdf1ENSMUSG00000109523Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GDF1 / P27539 / growth differentiation factor 1ENSG00000130283100
GDF3 / Q9NR23 / growth differentiation factor 3ENSG0000018434435
GDF10 / P55107 / growth differentiation factor 10ENSG0000026652425
BMP3 / P12645 / bone morphogenetic protein 3ENSG0000015278521
NODAL / Q96S42 / nodal growth differentiation factorENSG0000015657420
INHBA / P08476 / inhibin beta A subunitENSG0000012264120
INHBE / P58166 / inhibin beta E subunitENSG0000013926920
INHBB / P09529 / inhibin beta B subunitENSG0000016308319
INHBC / P55103 / inhibin beta C subunitENSG0000017518919
BMP15 / O95972 / bone morphogenetic protein 15ENSG0000013038518
GDF15 / Q99988 / growth differentiation factor 15ENSG0000013051318
TGFB3 / P10600 / transforming growth factor beta 3ENSG0000011969917
TGFB1 / P01137 / transforming growth factor beta 1ENSG0000010532917
TGFB2 / P61812 / transforming growth factor beta 2ENSG0000009296916
GDF9 / O60383 / growth differentiation factor 9ENSG0000016440416
GDF11 / O95390 / growth differentiation factor 11ENSG0000013541416
MSTN / O14793 / myostatinENSG0000013837916


Protein motifs (from Interpro)
Interpro ID Name
 IPR001839  Transforming growth factor-beta, C-terminal
 IPR006634  TRAM/LAG1/CLN8 homology domain
 IPR015615  Transforming growth factor-beta-related
 IPR016439  Sphingosine N-acyltransferase Lag1/Lac1-like
 IPR017948  Transforming growth factor beta, conserved site
 IPR029034  Cystine-knot cytokine


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0030148 sphingolipid biosynthetic process IDA
 biological_processGO:0035690 cellular response to drug IDA
 biological_processGO:0036146 cellular response to mycotoxin IDA
 biological_processGO:0046513 ceramide biosynthetic process ISS
 biological_processGO:0051974 negative regulation of telomerase activity IDA
 biological_processGO:0071492 cellular response to UV-A IDA
 biological_processGO:0072721 cellular response to dithiothreitol IDA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle ISS
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0008083 growth factor activity IEA
 molecular_functionGO:0050291 sphingosine N-acyltransferase activity TAS


Pathways (from Reactome)
Pathway description
Sphingolipid de novo biosynthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000233 Thin vermillion border 
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 HP:0000268 Dolichocephaly 
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 HP:0000316 Hypertelorism 
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 HP:0000337 Broad forehead "Abnormally large side-to-side distance of the forehead." [HPO:curators]
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 HP:0000520 Proptosis 
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 HP:0000726 Dementia 
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 HP:0001156 Brachydactyly 
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 HP:0001249 Mental retardation 
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
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 HP:0001636 Tetralogy of Fallot "A congenital cardiac malformation comprising pulmonary stenosis, overriding aorta, ventricular septum defect, and right ventricular hypertrophy. The diagnosis of TOF is made if at least three of the four above mentioned features are present." [HPO:curators]
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 HP:0001642 Pulmonic stenosis "A narrowing of the right ventricular outflow tract that can occur at the pulmonary valve (valvular stenosis) or just below the pulmonary valve (infundibular stenosis). Infundibular pulmonic stenosis is mostly caused by overgrowth of the heart muscle wall (hypertrophy of the septoparietal trabeculae). Pulmonic stenosis is often seen as a part of Fallot s tetralogy, in which case the events leading to the formation of the overriding aorta are also believed to be a cause of the pulmonic stenosis. The pulmonic stenosis is the major cause of the malformations seen in patients with Fallot tetralogy, with the other associated malformations acting as compensatory mechanisms to the pulmonic stenosis. The degree of stenosis varies between individuals with TOF, and is the primary determinant of symptoms and severity. This malformation is infrequently described as sub-pulmonary stenosis or subpulmonary obstruction." [HPO:curators]
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 HP:0001660 Persistant truncus arteriosus "Persistent Truncus Arteriosus results from a failure of the truncus arteriosus to close." [HPO:curators]
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 HP:0001669 Transposition of the great vessels 
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 HP:0001674 Complete atrioventricular canal "A congenital malformation characterized by atrial septal defect, ventricular septal defect), and abnormalities of the tricuspid and mitral valves." [HPO:curators]
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 HP:0001680 Coarctation of aorta "Coarctation of the aorta is a narrowing or constriction of the aorta just distal to the origin of the left subclavian artery." [HPO:curators]
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 HP:0001696 Situs inversus "A left-right reversal (or "mirror reflection") of the anatomical location of the major thoracic and abdominal organs." [HPO:curators]
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 HP:0001719 Double outlet right ventricle 
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 HP:0001746 Asplenia "Absence (aplasia) of the spleen." [HPO:curators]
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 HP:0001748 Polysplenia "Polysplenia is a congenital disease manifested by multiple small accessory spleens." [HPO:curators]
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 HP:0001939 Metabolism abnormality 
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 HP:0002069 Generalized tonic-clonic seizures "Generalized tonic-clonic seizures are `generalized seizures` (HP:0002197) in which the patient suddenly loses conciousness, the eyes roll back, and the entire body musculature undergoes tonic contractions. In the clonic phase of the seizure, there are rhythmic contractions of the musculature alternating with relaxation of all muscle groups. Loss of sphincter control during the seizure is common. This form of seizure was formerly commonly called grand mal seizure." [HPO:curators]
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 HP:0002101 Abnormal lung lobation "Defects in the formation of pulmonary lobules." [HPO:curators]
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 HP:0003676 Progressive disorder 
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 HP:0004209 Clinodactyly of the 5th finger "Clinodactyly refers to a bending or curvature of the `fifth finger` (FMA:24949) in the radial direction (i.e., towards the 4th finger)." [HPO:curators]
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 HP:0004467 Preauricular sinus "The preauricular sinus is a benign congenital lesion of the preauricular soft tissue consisting of a blind-ending narrow tube or pit. It is also known as preauricular pit, preauricular fistula, preauricular tract and preauricular cyst. It can be asymptomatic or present as an infected and discharging sinus. It presents as a small pit adjacent to the external ear usually located at the anterior margin of the ascending limb of the helix." [HPO:curators]
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 HP:0004935 Pulmonary artery atresia 
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 HP:0005105 Abnormal nasal morphology 
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 HP:0009891 Hypoplasia of the supraorbital ridges "Underdevelopment of the supraorbital ridges." [HPO:curators]
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 HP:0010055 Broad hallux 
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 HP:0010772 Anomalous pulmonary venous return "A developmental defect characterized by abnormal connection of or more pulmonary veins to the superior or inferior vena cava, the right atrium, or the coronary sinus, resulting in a left-to-right shunt of oxygenated blood." [HPO:probinson]
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 HP:0011536 Right atrial isomerism "Right atrial isomerism is characterized by bilateral triangular, morphologically right atrial, appendages, both joining the atrial chamber along a broad front with internal terminal crest." [DDD:dbrown, pmid:3408620]
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 HP:0011565 Common atrium "Complete absence of the interatrial septum with common atrioventricular valve and two atrioventricular connections." [DDD:dbrown, HPO:probinson]
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 HP:0100259 Postaxial polydactyly "A form of polydactyly in which the extra digit or digits are localized on the side of the fifth finger or fifth toe." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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