ENSG00000092969


Homo sapiens

Features
Gene ID: ENSG00000092969
  
Biological name :TGFB2
  
Synonyms : P61812 / TGFB2 / transforming growth factor beta 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q41
Gene start: 218346235
Gene end: 218444619
  
Corresponding Affymetrix probe sets: 209908_s_at (Human Genome U133 Plus 2.0 Array)   209909_s_at (Human Genome U133 Plus 2.0 Array)   220406_at (Human Genome U133 Plus 2.0 Array)   220407_s_at (Human Genome U133 Plus 2.0 Array)   228121_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000355896
Ensembl peptide - ENSP00000355897
NCBI entrez gene - 7042     See in Manteia.
OMIM - 190220
RefSeq - NM_001135599
RefSeq - NM_003238
RefSeq Peptide - NP_001129071
RefSeq Peptide - NP_003229
swissprot - P61812
Ensembl - ENSG00000092969
  
Related genetic diseases (OMIM): 614816 - Loeys-Dietz syndrome 4, 614816
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tgfb2ENSDARG00000027087Danio rerio
 TGFB2ENSGALG00000009612Gallus gallus
 Tgfb2ENSMUSG00000039239Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TGFB3 / P10600 / transforming growth factor beta 3ENSG0000011969953
TGFB1 / P01137 / transforming growth factor beta 1ENSG0000010532940
MSTN / O14793 / myostatinENSG0000013837923
GDF11 / O95390 / growth differentiation factor 11ENSG0000013541420
INHBA / P08476 / inhibin beta A subunitENSG0000012264119
INHBE / P58166 / inhibin beta E subunitENSG0000013926918
NODAL / Q96S42 / nodal growth differentiation factorENSG0000015657417
INHBB / P09529 / inhibin beta B subunitENSG0000016308317
GDF10 / P55107 / growth differentiation factor 10ENSG0000026652415
GDF3 / Q9NR23 / growth differentiation factor 3ENSG0000018434415
GDF1 / P27539 / growth differentiation factor 1ENSG0000013028314
BMP3 / P12645 / bone morphogenetic protein 3ENSG0000015278514
CERS1 / P27544 / ceramide synthase 1ENSG0000022380214
INHBC / P55103 / inhibin beta C subunitENSG0000017518914
BMP15 / O95972 / bone morphogenetic protein 15ENSG0000013038514
GDF9 / O60383 / growth differentiation factor 9ENSG0000016440413
GDF15 / Q99988 / growth differentiation factor 15ENSG0000013051311


Protein motifs (from Interpro)
Interpro ID Name
 IPR001111  TGF-beta, propeptide
 IPR001839  Transforming growth factor-beta, C-terminal
 IPR003940  Transforming growth factor, beta 2
 IPR015615  Transforming growth factor-beta-related
 IPR016319  Transforming growth factor-beta
 IPR017948  Transforming growth factor beta, conserved site
 IPR029034  Cystine-knot cytokine


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000902 cell morphogenesis IDA
 biological_processGO:0001501 skeletal system development ISS
 biological_processGO:0001525 angiogenesis TAS
 biological_processGO:0001654 eye development IDA
 biological_processGO:0001666 response to hypoxia IMP
 biological_processGO:0001822 kidney development ISS
 biological_processGO:0001837 epithelial to mesenchymal transition TAS
 biological_processGO:0001843 neural tube closure ISS
 biological_processGO:0001942 hair follicle development ISS
 biological_processGO:0002576 platelet degranulation TAS
 biological_processGO:0003007 heart morphogenesis IDA
 biological_processGO:0003148 outflow tract septum morphogenesis ISS
 biological_processGO:0003149 membranous septum morphogenesis ISS
 biological_processGO:0003179 heart valve morphogenesis ISS
 biological_processGO:0003181 atrioventricular valve morphogenesis ISS
 biological_processGO:0003184 pulmonary valve morphogenesis ISS
 biological_processGO:0003203 endocardial cushion morphogenesis ISS
 biological_processGO:0003215 cardiac right ventricle morphogenesis ISS
 biological_processGO:0003222 ventricular trabecula myocardium morphogenesis ISS
 biological_processGO:0003274 endocardial cushion fusion ISS
 biological_processGO:0003289 atrial septum primum morphogenesis ISS
 biological_processGO:0003407 neural retina development ISS
 biological_processGO:0006468 protein phosphorylation IDA
 biological_processGO:0007050 cell cycle arrest IDA
 biological_processGO:0007179 transforming growth factor beta receptor signaling pathway IDA
 biological_processGO:0007267 cell-cell signaling TAS
 biological_processGO:0007435 salivary gland morphogenesis IEP
 biological_processGO:0007507 heart development IDA
 biological_processGO:0008219 cell death IDA
 biological_processGO:0008283 cell proliferation TAS
 biological_processGO:0008284 positive regulation of cell proliferation IDA
 biological_processGO:0008285 negative regulation of cell proliferation IDA
 biological_processGO:0008347 glial cell migration IDA
 biological_processGO:0008584 male gonad development ISS
 biological_processGO:0009611 response to wounding IEP
 biological_processGO:0009792 embryo development ending in birth or egg hatching TAS
 biological_processGO:0010002 cardioblast differentiation IDA
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0010629 negative regulation of gene expression IDA
 biological_processGO:0010634 positive regulation of epithelial cell migration IDA
 biological_processGO:0010693 negative regulation of alkaline phosphatase activity IDA
 biological_processGO:0010718 positive regulation of epithelial to mesenchymal transition IDA
 biological_processGO:0010862 positive regulation of pathway-restricted SMAD protein phosphorylation IBA
 biological_processGO:0010936 negative regulation of macrophage cytokine production IDA
 biological_processGO:0014068 positive regulation of phosphatidylinositol 3-kinase signaling IDA
 biological_processGO:0016049 cell growth IEA
 biological_processGO:0016477 cell migration IDA
 biological_processGO:0016525 negative regulation of angiogenesis IDA
 biological_processGO:0030097 hemopoiesis ISS
 biological_processGO:0030199 collagen fibril organization IDA
 biological_processGO:0030307 positive regulation of cell growth IDA
 biological_processGO:0030308 negative regulation of cell growth IDA
 biological_processGO:0030326 embryonic limb morphogenesis ISS
 biological_processGO:0030509 BMP signaling pathway IBA
 biological_processGO:0030593 neutrophil chemotaxis TAS
 biological_processGO:0031069 hair follicle morphogenesis ISS
 biological_processGO:0032147 activation of protein kinase activity IDA
 biological_processGO:0032570 response to progesterone IDA
 biological_processGO:0032874 positive regulation of stress-activated MAPK cascade IDA
 biological_processGO:0032909 regulation of transforming growth factor beta2 production IMP
 biological_processGO:0033630 positive regulation of cell adhesion mediated by integrin IDA
 biological_processGO:0035910 ascending aorta morphogenesis ISS
 biological_processGO:0042060 wound healing ISS
 biological_processGO:0042416 dopamine biosynthetic process ISS
 biological_processGO:0042476 odontogenesis NAS
 biological_processGO:0042493 response to drug IDA
 biological_processGO:0042704 uterine wall breakdown TAS
 biological_processGO:0043525 positive regulation of neuron apoptotic process IDA
 biological_processGO:0045216 cell-cell junction organization IDA
 biological_processGO:0045726 positive regulation of integrin biosynthetic process IDA
 biological_processGO:0045747 positive regulation of Notch signaling pathway IDA
 biological_processGO:0045778 positive regulation of ossification IEP
 biological_processGO:0045787 positive regulation of cell cycle ISS
 biological_processGO:0045823 positive regulation of heart contraction IDA
 biological_processGO:0046580 negative regulation of Ras protein signal transduction ISS
 biological_processGO:0048103 somatic stem cell division ISS
 biological_processGO:0048468 cell development IBA
 biological_processGO:0048566 embryonic digestive tract development IEP
 biological_processGO:0048666 neuron development ISS
 biological_processGO:0048699 generation of neurons TAS
 biological_processGO:0048839 inner ear development ISS
 biological_processGO:0050680 negative regulation of epithelial cell proliferation IMP
 biological_processGO:0050714 positive regulation of protein secretion IDA
 biological_processGO:0050777 negative regulation of immune response TAS
 biological_processGO:0050778 positive regulation of immune response ISS
 biological_processGO:0051781 positive regulation of cell division IEA
 biological_processGO:0051794 regulation of timing of catagen IDA
 biological_processGO:0051795 positive regulation of timing of catagen IDA
 biological_processGO:0051891 positive regulation of cardioblast differentiation IDA
 biological_processGO:0060021 roof of mouth development ISS
 biological_processGO:0060038 cardiac muscle cell proliferation IDA
 biological_processGO:0060065 uterus development ISS
 biological_processGO:0060317 cardiac epithelial to mesenchymal transition IDA
 biological_processGO:0060389 pathway-restricted SMAD protein phosphorylation IDA
 biological_processGO:0060395 SMAD protein signal transduction IDA
 biological_processGO:0060412 ventricular septum morphogenesis ISS
 biological_processGO:0060413 atrial septum morphogenesis ISS
 biological_processGO:0061626 pharyngeal arch artery morphogenesis ISS
 biological_processGO:0097191 extrinsic apoptotic signaling pathway IDA
 biological_processGO:1902256 regulation of apoptotic process involved in outflow tract morphogenesis ISS
 biological_processGO:1902895 positive regulation of pri-miRNA transcription by RNA polymerase II IDA
 biological_processGO:1903701 substantia propria of cornea development ISS
 biological_processGO:1904888 cranial skeletal system development ISS
 biological_processGO:1905006 negative regulation of epithelial to mesenchymal transition involved in endocardial cushion formation ISS
 biological_processGO:1905007 positive regulation of epithelial to mesenchymal transition involved in endocardial cushion formation ISS
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0030424 axon ISS
 cellular_componentGO:0031012 extracellular matrix IDA
 cellular_componentGO:0031093 platelet alpha granule lumen TAS
 cellular_componentGO:0043025 neuronal cell body ISS
 molecular_functionGO:0001540 amyloid-beta binding IDA
 molecular_functionGO:0005102 signaling receptor binding IMP
 molecular_functionGO:0005114 type II transforming growth factor beta receptor binding IPI
 molecular_functionGO:0005125 cytokine activity TAS
 molecular_functionGO:0005160 transforming growth factor beta receptor binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008083 growth factor activity IEA
 molecular_functionGO:0034714 type III transforming growth factor beta receptor binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IDA
 molecular_functionGO:0046982 protein heterodimerization activity TAS


Pathways (from Reactome)
Pathway description
Platelet degranulation
Molecules associated with elastic fibres
ECM proteoglycans


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000023 Inguinal hernia 
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 HP:0000098 Increased body height 
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000278 Retrognathia 
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 HP:0000316 Hypertelorism 
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000525 Abnormality of the iris "An abnormality of the iris, which is the pigmented muscular tissue between the cornea and the lens, that is perforated by an opening called the pupil." [HPO:curators]
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 HP:0000766 Abnormality of the sternum 
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 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
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 HP:0000965 Cutis marmorata 
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 HP:0000978 Ecchymoses 
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 HP:0001166 Arachnodactyly "Abnormally long and slender fingers ("spider fingers")." [HPO:curators]
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 HP:0001634 Mitral valve prolapse 
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 HP:0001640 Cardiomegaly 
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 HP:0001643 Patent ductus arteriosus 
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 HP:0001647 Bicuspid aortic valve "The presence of a bicuspid `aortic valve` (FMA:7236)." [HPO:probinson]
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 HP:0001659 Aortic insufficiency "An insufficiency of the aortic valve, leading to regurgitation (backward flow) of blood from the aorta into the left ventricle." [HPO:curators]
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 HP:0001677 Coronary artery disease 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0002097 Emphysema 
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 HP:0002105 Hemoptysis "Coughing up (expectoration) of blood or blood-streaked sputum from the larynx, trachea, bronchi, or lungs." [HPO:curators]
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 HP:0002107 Pneumothorax 
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 HP:0002138 Subarachnoid hemorrhage 
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 HP:0002140 Ischemic stroke 
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 HP:0002326 Transient ischemic attack 
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 HP:0002616 Aortic root dilatation 
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 HP:0002647 Aortic dissection "Aortic dissection refers to a tear in the intimal layer of the aorta causing a separation between the intima and the medial layers of the aorta." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002686 Prenatal maternal abnormality 
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 HP:0002705 High, narrow palate "The presence of a high and narrow palate." [HPO:curators]
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 HP:0002875 Exertional dyspnea 
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 HP:0003302 Spondylolisthesis 
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 HP:0004933 ascending aortic dissection 
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 HP:0004944 Cerebral aneurysm "The presence of a localized dilatation or ballooning of a cerebral artery." [HPO:curators]
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 HP:0004950 Peripheral arterial disease 
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 HP:0004959 Dilatation of the descending thoracic aorta 
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 HP:0005112 Dilatation of the abdominal aorta 
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 HP:0005116 Arterial tortuosity "Abnormal tortuous (i.e., twisted) form of arteries." [HPO:curators]
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 HP:0005162 Impaired left ventricular function 
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 HP:0005692 Joint hyperflexibility 
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 HP:0011106 Hypovolemia "An decrease in the amount of intravascular fluid, particularly in the volume of the circulating blood." [HPO:probinson]
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 HP:0012163 Carotid artery aneurysm "A aneurysm (balooning or bulging out of the vessel wall) of a carotid artery." [HPO:probinson]
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 HP:0012499 Descending aortic dissection "A separation of the layers within the wall of the `descending aorta` (FMA:3784). Tears in the intimal layer result in the propagation of dissection (proximally or distally) secondary to blood entering the intima-media space." [HPO:probinson]
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 HP:0012763 Paroxysmal dyspnea "A sudden attack of dyspnea that occurs while the affected person is at rest." [HPO:probinson]
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 HP:0100749 Chest pain 
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 HP:0100775 Dural ectasia "A widening or ballooning of the dural sac surrounding the spinal cord usually at the lumbosacral level." [HPO:sdoelken]
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 HP:0200146 Cystic medial necrosis of the aorta 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000168056 LTBP3 / Q9NS15 / latent transforming growth factor beta binding protein 3  / complex / reaction
 ENSG00000049323 LTBP1 / Q14766 / latent transforming growth factor beta binding protein 1  / reaction / complex
 ENSG00000122176 FMOD / Q06828 / fibromodulin  / reaction / complex
 ENSG00000092969 TGFB2 / P61812 / transforming growth factor beta 2  / complex
 ENSG00000011465 DCN / P07585 / decorin  / reaction / complex
 ENSG00000182492 BGN / P21810 / biglycan  / complex / reaction






 

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