ENSG00000137693


Homo sapiens

Features
Gene ID: ENSG00000137693
  
Biological name :YAP1
  
Synonyms : P46937 / YAP1 / Yes associated protein 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q22.1
Gene start: 102110461
Gene end: 102233423
  
Corresponding Affymetrix probe sets: 213342_at (Human Genome U133 Plus 2.0 Array)   224894_at (Human Genome U133 Plus 2.0 Array)   224895_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000478927
Ensembl peptide - ENSP00000445635
Ensembl peptide - ENSP00000487519
Ensembl peptide - ENSP00000282441
Ensembl peptide - ENSP00000331023
Ensembl peptide - ENSP00000431574
Ensembl peptide - ENSP00000431626
Ensembl peptide - ENSP00000434134
Ensembl peptide - ENSP00000435602
NCBI entrez gene - 10413     See in Manteia.
OMIM - 606608
RefSeq - XM_017017093
RefSeq - NM_001282097
RefSeq - NM_001282098
RefSeq - NM_001282099
RefSeq - NM_001282100
RefSeq - NM_001282101
RefSeq - NM_006106
RefSeq - XM_005271378
RefSeq - XM_005271380
RefSeq - XM_005271381
RefSeq - XM_005271383
RefSeq - XM_011542555
RefSeq - XM_011542556
RefSeq - NM_001130145
RefSeq - NM_001195044
RefSeq - NM_001195045
RefSeq Peptide - NP_001181973
RefSeq Peptide - NP_001181974
RefSeq Peptide - NP_001269026
RefSeq Peptide - NP_001269027
RefSeq Peptide - NP_001269028
RefSeq Peptide - NP_001269029
RefSeq Peptide - NP_001269030
RefSeq Peptide - NP_006097
RefSeq Peptide - NP_001123617
swissprot - A0A024R3E4
swissprot - H0YCI3
swissprot - P46937
Ensembl - ENSG00000137693
  
Related genetic diseases (OMIM): 120433 - Coloboma, ocular, with or without hearing impairment, cleft lip/palate, and/or mental retardation, 120433
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 yap1ENSDARG00000068401Danio rerio
 YAP1ENSGALG00000038154Gallus gallus
 Yap1ENSMUSG00000053110Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
WWTR1 / Q9GZV5 / WW domain containing transcription regulator 1ENSG0000001840840


Protein motifs (from Interpro)
Interpro ID Name
 IPR001202  WW domain
 IPR036020  WW domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000902 cell morphogenesis IEA
 biological_processGO:0001570 vasculogenesis IEA
 biological_processGO:0003143 embryonic heart tube morphogenesis IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006367 transcription initiation from RNA polymerase II promoter TAS
 biological_processGO:0006974 cellular response to DNA damage stimulus IDA
 biological_processGO:0008283 cell proliferation IDA
 biological_processGO:0008284 positive regulation of cell proliferation IEA
 biological_processGO:0010837 regulation of keratinocyte proliferation IEA
 biological_processGO:0030216 keratinocyte differentiation IEA
 biological_processGO:0030857 negative regulation of epithelial cell differentiation IEA
 biological_processGO:0030903 notochord development IEA
 biological_processGO:0032570 response to progesterone IDA
 biological_processGO:0033148 positive regulation of intracellular estrogen receptor signaling pathway IDA
 biological_processGO:0035019 somatic stem cell population maintenance IEA
 biological_processGO:0035329 hippo signaling IEA
 biological_processGO:0042127 regulation of cell proliferation IEA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 biological_processGO:0046622 positive regulation of organ growth IEA
 biological_processGO:0048339 paraxial mesoderm development IEA
 biological_processGO:0048368 lateral mesoderm development IEA
 biological_processGO:0050767 regulation of neurogenesis IDA
 biological_processGO:0050847 progesterone receptor signaling pathway IDA
 biological_processGO:0060242 contact inhibition IDA
 biological_processGO:0060449 bud elongation involved in lung branching IEA
 biological_processGO:0060487 lung epithelial cell differentiation IEA
 biological_processGO:0060828 regulation of canonical Wnt signaling pathway IEA
 biological_processGO:0065003 protein-containing complex assembly IMP
 biological_processGO:0071300 cellular response to retinoic acid IEA
 biological_processGO:0071480 cellular response to gamma radiation IDA
 biological_processGO:0072091 regulation of stem cell proliferation IDA
 biological_processGO:0072307 regulation of metanephric nephron tubule epithelial cell differentiation IEA
 biological_processGO:0090263 positive regulation of canonical Wnt signaling pathway IEA
 biological_processGO:1902036 regulation of hematopoietic stem cell differentiation TAS
 biological_processGO:1902459 positive regulation of stem cell population maintenance IEA
 biological_processGO:1903507 negative regulation of nucleic acid-templated transcription IEA
 biological_processGO:2000737 negative regulation of stem cell differentiation IEA
 biological_processGO:2001237 negative regulation of extrinsic apoptotic signaling pathway IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005667 transcription factor complex IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0071148 TEAD-1-YAP complex IDA
 cellular_componentGO:0071149 TEAD-2-YAP complex IDA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001076 transcription factor activity, RNA polymerase II transcription factor binding IEA
 molecular_functionGO:0003682 chromatin binding IEA
 molecular_functionGO:0003713 transcription coactivator activity IMP
 molecular_functionGO:0003714 transcription corepressor activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0033613 activating transcription factor binding IPI
 molecular_functionGO:0044212 transcription regulatory region DNA binding IDA
 molecular_functionGO:0046982 protein heterodimerization activity IPI
 molecular_functionGO:0070064 proline-rich region binding IEA


Pathways (from Reactome)
Pathway description
Nuclear signaling by ERBB4
Signaling by Hippo
YAP1- and WWTR1 (TAZ)-stimulated gene expression
RUNX1 regulates transcription of genes involved in differentiation of HSCs
RUNX2 regulates osteoblast differentiation
RUNX3 regulates YAP1-mediated transcription


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
Show

 HP:0000204 Cleft lip "A gap in the `upper lip` (FMA:59817). This is a congenital defect resulting from nonfusion of tissues of the lip during embryonal development." [HPO:probinson]
Show

 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
Show

 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
Show

 HP:0000501 Glaucoma "Glaucoma refers loss of retinal ganglion cells in a characteristic pattern of optic neuropathy usually associated with increased intraocular pressure." [HPO:curators]
Show

 HP:0000505 Impaired vision 
Show

 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
Show

 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
Show

 HP:0000541 Detached retina 
Show

 HP:0000567 Chorioretinal coloboma 
Show

 HP:0000568 Microphthalmos "A developmental anomaly characterized by abnormal smallness of one or both eyes." [HPO:curators]
Show

 HP:0000612 Iris coloboma "A `coloboma` (HP:0000589) of the `iris` (FMA:58235)." [HPO:probinson]
Show

 HP:0000627 Posterior embryotoxon 
Show

 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
Show

 HP:0000648 Optic atrophy 
Show

 HP:0000790 Hematuria "The presence of blood in the urine. Hematuria may be gross hematuria (visible to the naked eye) or microscopic hematuria (detected by dipstick or microscopic examination of the urine)." [HPO:curators]
Show

 HP:0001249 Mental retardation 
Show

 HP:0002744 Bilateral cleft lip/palate "Cleft lip/palate affecting both sides of the face." [HPO:curators]
Show

 HP:0007957 Variable degree of corneal opacities 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000114019 AMOTL2 / Q9Y2J4 / angiomotin like 2  / reaction / complex
 ENSG00000131023 LATS1 / O95835 / large tumor suppressor kinase 1  / reaction
 ENSG00000178568 ERBB4 / Q15303 / erb-b2 receptor tyrosine kinase 4  / complex / reaction
 ENSG00000067955 CBFB / Q13951 / core-binding factor beta subunit  / complex / reaction
 ENSG00000126016 AMOT / Q4VCS5 / angiomotin  / reaction / complex
 ENSG00000166913 YWHAB / P31946 / tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein beta  / reaction / complex
 ENSG00000119139 TJP2 / Q9UDY2 / tight junction protein 2  / reaction / complex
 ENSG00000074219 TEAD2 / Q15562 / TEA domain transcription factor 2  / reaction / complex
 ENSG00000124813 RUNX2 / Q13950 / runt related transcription factor 2  / reaction / complex
 ENSG00000197122 SRC / P12931 / SRC proto-oncogene, non-receptor tyrosine kinase  / reaction / complex
 ENSG00000078900 TP73 / O15350 / tumor protein p73  / reaction / complex
 ENSG00000197905 TEAD4 / Q15561 / TEA domain transcription factor 4  / reaction / complex
 ENSG00000176105 YES1 / P07947 / YES proto-oncogene 1, Src family tyrosine kinase  / reaction / complex
 ENSG00000166025 AMOTL1 / Q8IY63 / angiomotin like 1  / complex / reaction
 ENSG00000159216 RUNX1 / Q01196 / runt related transcription factor 1  / reaction / complex
 ENSG00000020633 RUNX3 / Q13761 / runt related transcription factor 3  / complex / reaction
 ENSG00000007866 TEAD3 / Q99594 / TEA domain transcription factor 3  / complex / reaction
 ENSG00000097007 ABL1 / P00519 / ABL proto-oncogene 1, non-receptor tyrosine kinase  / reaction
 ENSG00000187079 TEAD1 / P28347 / TEA domain transcription factor 1  / reaction / complex
 ENSG00000150457 LATS2 / Q9NRM7 / large tumor suppressor kinase 2  / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr