ENSG00000077782


Homo sapiens

Features
Gene ID: ENSG00000077782
  
Biological name :FGFR1
  
Synonyms : FGFR1 / fibroblast growth factor receptor 1 / P11362
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: p11.23
Gene start: 38411138
Gene end: 38468834
  
Corresponding Affymetrix probe sets: 207822_at (Human Genome U133 Plus 2.0 Array)   207937_x_at (Human Genome U133 Plus 2.0 Array)   210973_s_at (Human Genome U133 Plus 2.0 Array)   211535_s_at (Human Genome U133 Plus 2.0 Array)   215404_x_at (Human Genome U133 Plus 2.0 Array)   226705_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000398318
Ensembl peptide - ENSP00000393312
Ensembl peptide - ENSP00000400162
Ensembl peptide - ENSP00000484553
Ensembl peptide - ENSP00000435283
Ensembl peptide - ENSP00000435254
Ensembl peptide - ENSP00000434869
Ensembl peptide - ENSP00000434800
Ensembl peptide - ENSP00000434712
Ensembl peptide - ENSP00000434473
Ensembl peptide - ENSP00000433569
Ensembl peptide - ENSP00000433163
Ensembl peptide - ENSP00000432972
Ensembl peptide - ENSP00000400708
Ensembl peptide - ENSP00000327229
Ensembl peptide - ENSP00000337247
Ensembl peptide - ENSP00000340636
Ensembl peptide - ENSP00000348537
Ensembl peptide - ENSP00000380280
Ensembl peptide - ENSP00000380292
Ensembl peptide - ENSP00000380297
Ensembl peptide - ENSP00000380302
Ensembl peptide - ENSP00000392645
NCBI entrez gene - 2260     See in Manteia.
OMIM - 136350
RefSeq - XM_017013231
RefSeq - XM_006716314
RefSeq - XM_011544443
RefSeq - XM_011544444
RefSeq - XM_011544445
RefSeq - XM_011544446
RefSeq - XM_011544447
RefSeq - XM_011544448
RefSeq - XM_011544449
RefSeq - XM_011544450
RefSeq - XM_011544451
RefSeq - XM_011544452
RefSeq - XM_017013219
RefSeq - XM_017013220
RefSeq - XM_017013221
RefSeq - XM_017013222
RefSeq - XM_017013223
RefSeq - XM_017013224
RefSeq - XM_017013225
RefSeq - XM_017013226
RefSeq - XM_017013227
RefSeq - XM_017013228
RefSeq - XM_017013229
RefSeq - XM_017013230
RefSeq - NM_001174063
RefSeq - NM_001174064
RefSeq - NM_001174065
RefSeq - NM_001174066
RefSeq - NM_001174067
RefSeq - NM_015850
RefSeq - NM_023105
RefSeq - NM_023106
RefSeq - NM_023110
RefSeq - XM_006716303
RefSeq - XM_006716304
RefSeq - XM_006716306
RefSeq - XM_006716307
RefSeq - XM_006716309
RefSeq - XM_006716310
RefSeq - XM_006716311
RefSeq - XM_006716312
RefSeq - XM_006716313
RefSeq Peptide - NP_001167538
RefSeq Peptide - NP_056934
RefSeq Peptide - NP_075593
RefSeq Peptide - NP_075594
RefSeq Peptide - NP_075598
RefSeq Peptide - NP_001167536
RefSeq Peptide - NP_001167537
RefSeq Peptide - NP_001167534
RefSeq Peptide - NP_001167535
swissprot - C1KBH7
swissprot - B5A958
swissprot - E9PQ40
swissprot - P11362
swissprot - A0A0S2Z3Q6
swissprot - H0YE20
swissprot - E9PNM3
swissprot - E9PN14
swissprot - E9PKX3
swissprot - E9PKV7
swissprot - E9PKF2
swissprot - E7EU09
swissprot - C9J205
swissprot - C9J1L5
Ensembl - ENSG00000077782
  
Related genetic diseases (OMIM): 613001 - Encephalocraniocutaneous lipomatosis, 613001
  615465 - Hartsfield syndrome, 615465
  147950 - Hypogonadotropic hypogonadism 2 with or without anosmia, 147950
  123150 - Jackson-Weiss syndrome, 123150
  166250 - Osteoglophonic dysplasia, 166250
  101600 - Pfeiffer syndrome, 101600
  190440 - Trigonocephaly 1, 190440
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fgfr1aENSDARG00000011027Danio rerio
 fgfr1bENSDARG00000011190Danio rerio
 FGFR1ENSGALG00000039786Gallus gallus
 Fgfr1ENSMUSG00000031565Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FGFR2 / P21802 / fibroblast growth factor receptor 2ENSG0000006646867
FGFR3 / P22607 / fibroblast growth factor receptor 3ENSG0000006807857
FGFR4 / P22455 / fibroblast growth factor receptor 4ENSG0000016086753
KDR / P35968 / kinase insert domain receptorENSG0000012805230
FLT4 / P35916 / fms related tyrosine kinase 4ENSG0000003728028
P09619 / PDGFRB / platelet derived growth factor receptor betaENSG0000011372128
RET / P07949 / ret proto-oncogeneENSG0000016573128
P16234 / PDGFRA / platelet derived growth factor receptor alphaENSG0000013485327
FLT1 / P17948 / fms related tyrosine kinase 1ENSG0000010275527
CSF1R / P07333 / colony stimulating factor 1 receptorENSG0000018257826
KIT / P10721 / KIT proto-oncogene receptor tyrosine kinaseENSG0000015740426
FLT3 / P36888 / fms related tyrosine kinase 3ENSG0000012202525


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR001245  Serine-threonine/tyrosine-protein kinase, catalytic domain
 IPR003598  Immunoglobulin subtype 2
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR008266  Tyrosine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily
 IPR013098  Immunoglobulin I-set
 IPR013151  Immunoglobulin
 IPR013783  Immunoglobulin-like fold
 IPR016248  Fibroblast growth factor receptor family
 IPR017441  Protein kinase, ATP binding site
 IPR020635  Tyrosine-protein kinase, catalytic domain
 IPR028174  Fibroblast growth factor receptor 1, catalytic domain
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0000165 MAPK cascade TAS
 biological_processGO:0001501 skeletal system development TAS
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0001657 ureteric bud development IEA
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0001759 organ induction IEA
 biological_processGO:0001764 neuron migration TAS
 biological_processGO:0002053 positive regulation of mesenchymal cell proliferation IEA
 biological_processGO:0002062 chondrocyte differentiation IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006468 protein phosphorylation NAS
 biological_processGO:0007420 brain development IEA
 biological_processGO:0007435 salivary gland morphogenesis IEA
 biological_processGO:0007605 sensory perception of sound IEA
 biological_processGO:0008284 positive regulation of cell proliferation IGI
 biological_processGO:0008543 fibroblast growth factor receptor signaling pathway IPI
 biological_processGO:0010468 regulation of gene expression IEA
 biological_processGO:0010518 positive regulation of phospholipase activity TAS
 biological_processGO:0010629 negative regulation of gene expression IEA
 biological_processGO:0010863 positive regulation of phospholipase C activity IDA
 biological_processGO:0010966 regulation of phosphate transport IEA
 biological_processGO:0010976 positive regulation of neuron projection development IEA
 biological_processGO:0014068 positive regulation of phosphatidylinositol 3-kinase signaling TAS
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0016477 cell migration TAS
 biological_processGO:0018108 peptidyl-tyrosine phosphorylation IDA
 biological_processGO:0021769 orbitofrontal cortex development IEA
 biological_processGO:0021847 ventricular zone neuroblast division IEA
 biological_processGO:0030324 lung development IEA
 biological_processGO:0030326 embryonic limb morphogenesis IEA
 biological_processGO:0030901 midbrain development IEA
 biological_processGO:0035607 fibroblast growth factor receptor signaling pathway involved in orbitofrontal cortex development IEA
 biological_processGO:0036092 phosphatidylinositol-3-phosphate biosynthetic process IEA
 biological_processGO:0042127 regulation of cell proliferation IEA
 biological_processGO:0042472 inner ear morphogenesis IEA
 biological_processGO:0042473 outer ear morphogenesis IEA
 biological_processGO:0042474 middle ear morphogenesis IEA
 biological_processGO:0043009 chordate embryonic development TAS
 biological_processGO:0043406 positive regulation of MAP kinase activity IDA
 biological_processGO:0043410 positive regulation of MAPK cascade IMP
 biological_processGO:0043536 positive regulation of blood vessel endothelial cell migration IGI
 biological_processGO:0043583 ear development IEA
 biological_processGO:0045595 regulation of cell differentiation TAS
 biological_processGO:0045666 positive regulation of neuron differentiation IMP
 biological_processGO:0045787 positive regulation of cell cycle IEA
 biological_processGO:0046777 protein autophosphorylation IDA
 biological_processGO:0046854 phosphatidylinositol phosphorylation IEA
 biological_processGO:0048015 phosphatidylinositol-mediated signaling TAS
 biological_processGO:0048339 paraxial mesoderm development IEA
 biological_processGO:0048378 regulation of lateral mesodermal cell fate specification IEA
 biological_processGO:0048469 cell maturation IEA
 biological_processGO:0048514 blood vessel morphogenesis IEA
 biological_processGO:0048699 generation of neurons IEA
 biological_processGO:0048705 skeletal system morphogenesis TAS
 biological_processGO:0048762 mesenchymal cell differentiation IEA
 biological_processGO:0051174 regulation of phosphorus metabolic process IEA
 biological_processGO:0051897 positive regulation of protein kinase B signaling TAS
 biological_processGO:0060045 positive regulation of cardiac muscle cell proliferation IEA
 biological_processGO:0060117 auditory receptor cell development IEA
 biological_processGO:0060445 branching involved in salivary gland morphogenesis IEA
 biological_processGO:0060484 lung-associated mesenchyme development IEA
 biological_processGO:0060665 regulation of branching involved in salivary gland morphogenesis by mesenchymal-epithelial signaling IEA
 biological_processGO:0070640 vitamin D3 metabolic process IEA
 biological_processGO:0090080 positive regulation of MAPKKK cascade by fibroblast growth factor receptor signaling pathway IEA
 biological_processGO:0090272 negative regulation of fibroblast growth factor production IEA
 biological_processGO:1903465 positive regulation of mitotic cell cycle DNA replication IEA
 biological_processGO:1905564 positive regulation of vascular endothelial cell proliferation IGI
 biological_processGO:2000546 positive regulation of endothelial cell chemotaxis to fibroblast growth factor IDA
 biological_processGO:2000830 positive regulation of parathyroid hormone secretion IEA
 biological_processGO:2001239 regulation of extrinsic apoptotic signaling pathway in absence of ligand IEA
 cellular_componentGO:0005576 extracellular region NAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane NAS
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0043235 receptor complex IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004713 protein tyrosine kinase activity TAS
 molecular_functionGO:0004714 transmembrane receptor protein tyrosine kinase activity IEA
 molecular_functionGO:0005007 fibroblast growth factor-activated receptor activity IDA
 molecular_functionGO:0005088 Ras guanyl-nucleotide exchange factor activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008201 heparin binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016303 1-phosphatidylinositol-3-kinase activity TAS
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0017134 fibroblast growth factor binding IDA
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IPI
 molecular_functionGO:0046934 phosphatidylinositol-4,5-bisphosphate 3-kinase activity TAS
 molecular_functionGO:0090722 receptor-receptor interaction IDA


Pathways (from Reactome)
Pathway description
Signaling by activated point mutants of FGFR1
Signaling by FGFR1 in disease
Signaling by plasma membrane FGFR1 fusions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000002 Abnormality of body height 
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 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000013 Hypoplastic uterus 
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 HP:0000023 Inguinal hernia 
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 HP:0000026 Hypogonadism, male "Lack of function of the males gonads (i.e., testes)." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000040 Enlarged penis 
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 HP:0000041 Chordee "A condition in which the head of the penis curves downward." [HPO:curators]
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 HP:0000044 Hypogonadotrophic hypogonadism "Hypogonadotropic hypogonadism is characterized by reduced function of the gonads (testes in males or ovaries in females) and results from the absence of the gonadal stimulating pituitary hormones: follicle stimulating hormone (FSH) and luteinizing hormone (LH)." [HPO:curators]
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 HP:0000047 Hypospadias "Displacement of the urethral opening on the ventral (inferior) surface of the penis." [HPO:curators]
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 HP:0000054 Micropenis 
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 HP:0000104 Renal agenesis 
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 HP:0000125 Pelvic kidney "A developmental defect in which a kidney is located in an abnormal anatomic position within the pelvis." [HPO:curators]
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 HP:0000126 Hydronephrosis 
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 HP:0000134 Hypogonadism, female "Lack of function of the female gonads (i.e. ovaries)." [HPO:curators]
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 HP:0000144 Decreased fertility 
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 HP:0000164 Abnormality of the teeth "Any abnormality of the primary (deciduous) or permanent teeth." [HPO:curators]
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000204 Cleft lip "A gap in the `upper lip` (FMA:59817). This is a congenital defect resulting from nonfusion of tissues of the lip during embryonal development." [HPO:probinson]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000238 Hydrocephalus 
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 HP:0000243 Trigonocephaly 
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 HP:0000244 Brachyturricephaly 
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 HP:0000248 Brachycephaly "Brachycephaly refers to a short, wide head, which is often caused by premature closure of both coronal sutures." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000303 Mandibular prognathia "Abnormal prominence of the chin related to an abnormally long mandible." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000327 Hypoplasia of the maxilla "Underdevelopment of the `Maxilla` (FMA:9711)." [HPO:probinson]
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 HP:0000336 Prominent supraorbital ridges "Abnormal prominence of the supraorbital ridges, which are bony ridge located above the eye sockets in the area of the eyebrows." [HPO:curators]
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 HP:0000343 Long philtrum 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000348 High forehead "An abnormally increased height of the forehead." [HPO:curators]
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 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
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 HP:0000365 Hearing loss 
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 HP:0000368 Low-set, posteriorly rotated ears 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000384 Preauricular skin tag "A rudimentary tag of ear tissue often containing a core of cartilage and located just in front of the auricle (outer part of the ear)." [HPO:curators]
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000411 Protruding ears 
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000445 Broad nose 
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 HP:0000452 Choanal stenosis "Abnormal narrowing of the choana (the posterior nasal aperture)." [HPO:curators]
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 HP:0000453 Choanal atresia "Absence or abnormal closure of the choana (the posterior nasal aperture)." [HPO:curators]
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 HP:0000458 Anosmia "An inability to perceive odors. This is a general term describing inability to smell arising in any part of the process of smelling from absorption of odorants into the nasal mucous overlying the olfactory epithelium, diffusion to the cilia, binding to olfactory receptor sites, generation of action potentials in olfactory neurons, and perception of a smell." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000470 Short neck 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000488 Retinopathy 
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000499 Abnormality of the eyelashes "An abnormality of the `eyelashes` (FMA:53669)." [HPO:probinson]
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 HP:0000505 Impaired vision 
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 HP:0000506 Telecanthus "An abnormally increased distance between the medial canthi (angle between eyelids) of the eyelids." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000520 Proptosis 
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 HP:0000551 Abnormal color vision 
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 HP:0000568 Microphthalmos "A developmental anomaly characterized by abnormal smallness of one or both eyes." [HPO:curators]
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 HP:0000586 Shallow orbits 
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 HP:0000593 Abnormality of the anterior chamber "Abnormality of the anterior chamber, which is the space in the eye that is behind the cornea and in front of the iris." [HPO:curators]
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 HP:0000601 Hypotelorism 
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 HP:0000612 Iris coloboma "A `coloboma` (HP:0000589) of the `iris` (FMA:58235)." [HPO:probinson]
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 HP:0000614 Abnormality of the lacrimal duct 
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 HP:0000625 Eyelid, cleft "A short discontinuity of the margin of the lower or upper eyelid." [pmid:19125427]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000647 Sclerocornea 
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 HP:0000664 Synophrys "Fusion of the left and right `eyebrow` (FMA:54237)." [HPO:probinson]
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 HP:0000677 Oligodontia "The condition of missing over 6 teeth (Missing up to 6 teeth is referred to a hypodontia)." [HPO:curators]
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 HP:0000678 Dental overcrowding 
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 HP:0000691 Microdontia 
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 HP:0000706 Unerupted teeth 
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 HP:0000716 Depression "A condition characterized by pervasive dysphoric mood, loss of interests, and inability to experience pleasure." [HPO:curators]
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 HP:0000717 Autism 
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 HP:0000739 Anxiety 
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 HP:0000750 Impaired language development 
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 HP:0000771 Gynecomastia 
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 HP:0000786 Primary amenorrhea 
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 HP:0000802 Impotence 
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 HP:0000823 Delayed puberty 
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 HP:0000830 Hypopituitarism "A condition of reduced function of the pituitary gland characterized by decreased secretion of one or more of the eight pituitary hormones." [HPO:curators]
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 HP:0000869 Secondary amenorrhea 
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 HP:0000873 Diabetes insipidus "A state of excessive water intake and hypotonic (dilute) polyuria. Diabetes insipidus may be due to failure of vasopressin (AVP) release (central or neurogenic diabetes insipidus) or to a failure of the kidney to respond to AVP (nephrogenic diabetes insipidus)." [HPO:curators]
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 HP:0000882 Hypoplastic scapulae 
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 HP:0000889 Abnormality of the clavicles "Any abnormality of the clavicles (collar bones)." [HPO:curators]
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 HP:0000926 Platyspondyly 
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 HP:0000938 Osteopenia "Osteopenia refers to a reduction in bone mineral density (BMD) below normal peak BMD but not low enough to be classified as osteoporosis. According to the WHO, osteopenia is characterized by a value of BMD more than 1 standard deviation below the young adult mean, but less than 2 standard deviations below this value." [HPO:curators]
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 HP:0000939 Osteoporosis "Osteoporosis is a systemic skeletal disease characterized by low bone density and microarchitectural deterioration of bone tissue with a consequent increase in bone fragility. According to the WHO, osteoporosis is characterized by a value of BMD 2.5 standard deviations or more below the young adult mean." [HPO:curators]
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 HP:0000943 Dysostosis multiplex 
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 HP:0000958 Dry skin 
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 HP:0000966 Hypohidrosis "Abnormally diminished capacity to sweat." [HPO:curators]
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 HP:0000991 Xanthomatosis "The presence of multiple xanthomas (xanthomata) in the skin. Xanthomas are yellowish, firm, lipid-laden nodules in the skin." [HPO:curators]
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 HP:0001012 Lipomas "The presence of multiple lipomas (a type of benign tissue made of fatty tissue)." [HPO:curators]
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 HP:0001031 Subcutaneous lipomas 
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 HP:0001052 Nevus flammeus "A congenital vascular malformation consisting of superficial and deep dilated capillaries in the skin which produce a reddish to purplish discolouration of the skin." [HPO:sdoelken]
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 HP:0001140 Epibulbar dermoids "An epibulbar dermoid is a benign tumor typically found at the junction of the cornea and sclera (limbal epibullar dermoid)." [HPO:curators]
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 HP:0001156 Brachydactyly 
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 HP:0001159 Syndactyly "Webbing or fusion of the fingers or toes, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers or toes in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0001169 Broad hands 
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 HP:0001171 Ectrodactyly (hands) 
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 HP:0001230 Broad metacarpals 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001269 Hemiparesis "Relatively mild weakness in the arm, leg, and in some cases the face on one side of the body." [HPO:curators]
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001305 Dandy-Walker malformation "A congenital brain malformation typically characterized by incomplete formation of the cerebellar vermis, dilation of the fourth ventricle, and enlargement of the posterior fossa. In layman s terms, Dandy Walker malformation is a cyst in the cerebellum (typically symmetrical) that is involved with the fourth ventricle. This may interfere with the body s ability to drain cerebrospinal fluid from the brain, resulting in hydrocephalus. Dandy Walker cysts are formed during early embryonic development, while the brain forms. The cyst in the cerebellum typically has several blood vessels running through it connecting to the brain, thereby prohibiting surgical removal." [HPO:curators]
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001324 Muscle weakness "Reduced strength of muscles." [HPO:curators]
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 HP:0001331 Absent septum pellucidum "Absence of the septum pellucidum." [HPO:curators]
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 HP:0001335 Mirror hand movements (bimanual synkinesia) 
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001363 Craniosynostosis "Craniosynostosis refers to the premature closure of the cranial sutures. Primary craniosynostosis refers to the closure of one or more sutures due to abnormalities in skull development, and secondary craniosynostosis results from failure of brain growth." [HPO:curators]
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 HP:0001425 Heterogeneous 
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 HP:0001442 Somatic mosaicism 
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 HP:0001482 Subcutaneous nodules 
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 HP:0001508 Failure to thrive 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001513 Obesity "A status with BODY WEIGHT that is grossly above the acceptable or desirable weight, usually due to accumulation of excess FATS in the body. The standards may vary with age, sex, genetic or cultural background. In the BODY MASS INDEX, a BMI greater than 30.0 kg/m2 is considered obese, and a BMI greater than 40.0 kg/m2 is considered morbidly obese (MORBID OBESITY)." [MeSH:D009765]
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 HP:0001531 Failure to thrive in infancy 
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 HP:0001539 Omphalocele 
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 HP:0001596 Alopecia "Loss of hair from the head or body." [HPO:curators]
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 HP:0001608 Abnormality of the voice "Any abnormality of the voice." [HPO:curators]
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
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 HP:0001650 Aortic stenosis "The presence of a stenosis (narrowing) of the aortic valve." [HPO:curators]
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 HP:0001680 Coarctation of aorta "Coarctation of the aorta is a narrowing or constriction of the aorta just distal to the origin of the left subclavian artery." [HPO:curators]
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 HP:0001682 Subaortic stenosis "A fixed form of obstruction to blood flow across the left-ventricular outflow tract related to stenosis (narrowing) below the level of the aortic valve." [HPO:curators]
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 HP:0001704 Tricuspid valve prolapse 
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 HP:0001739 Abnormality of the nasopharynx 
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 HP:0001742 Nasal obstruction leading to mouth breathing 
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 HP:0001761 Pes cavus 
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0001769 Broad feet "Increased width of the feet." [HPO:curators]
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 HP:0001770 Toe syndactyly "Webbing or fusion of the toes, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the toes in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0001773 Short, broad feet "Abnormally short and wide feet." [HPO:curators]
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 HP:0001783 Broad metatarsals 
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 HP:0001800 Hypoplastic toenails "Underdeveloped toenails." [HPO:curators]
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 HP:0001959 Polydipsia 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002019 Constipation 
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 HP:0002032 Esophageal atresia "A developmental defect resulting in complete obliteration of the lumen of the esophagus such that the esophagus ends in a blind pouch rather than connecting to the stomach." [HPO:curators]
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 HP:0002063 Rigidity 
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002084 Encephalocele 
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 HP:0002092 Pulmonary hypertension 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002098 Respiratory distress 
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 HP:0002119 Ventriculomegaly 
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002231 Sparse body hair "Sparseness of the body hair." [HPO:probinson]
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 HP:0002245 Meckel diverticulum 
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 HP:0002300 Mutism 
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 HP:0002301 Hemiplegia "Paralysis (complete loss of muscle function) in the arm, leg, and in some cases the face on one side of the body." [HPO:curators]
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 HP:0002308 Arnold-Chiari malformation "Arnold-Chiari malformation consists of a downward displacement of the cerebellar tonsils and the medulla through the foramen magnum, sometimes causing hydrocephalus as a result of obstruction of CSF outflow." [HPO:curators]
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 HP:0002357 Dysphasia 
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 HP:0002360 Sleep disturbances "An abnormality of sleep including such phenomena as 1) insomnia/hypersomnia, 2) non-restorative sleep, 3) sleep schedule disorder, 4) excessive daytime somnolence, 5) sleep apnea, and 6) restlessness." [HPO:curators]
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 HP:0002381 Aphasia 
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 HP:0002410 Aqueductal stenosis "Stenosis of the cerebral aqueduct (also known as the mesencephalic duct, aqueductus mesencephali, or aqueduct of Sylvius), which connects the third cerebral ventricle in the diencephalon to the fourth ventricle, which is between the pons and cerebellum." [HPO:curators]
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 HP:0002445 Tetraplegia 
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 HP:0002514 Cerebral calcification "The presence of calcification within brain structures." [HPO:curators]
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 HP:0002539 Cortical dysplasia 
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 HP:0002575 Tracheoesophageal fistula "An abnormal connection (fistula) between the esophagus and the trachea." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002652 Skeletal dysplasia 
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 HP:0002659 Increased susceptibility to fractures "An abnormally increased tendency to fractures of bones caused by an abnormal reduction in bone strength that is generally associated with an increased risk of fracture." [HPO:sdoelken]
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 HP:0002676 Cloverleaf skull "A deformity of the skull that resembles a cloverleaf and is characterized by very prominent temporal bones with constriction of the remainder of the cranium. Cloverleaf skull is commonly accompanied by hydrocephalus." [HPO:curators]
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0002757 Recurrent fractures "The repeated occurence of bone fractures (implying an abnormally increased tendency for fracture)." [HPO:curators]
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 HP:0002761 Generalized joint laxity "Joint hypermobility (ability of a joint to move beyond its normal range of motion) affecting many or all joints of the body." [HPO:curators]
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 HP:0002763 Abnormality of cartilage "Any abnormality of cartilage." [HPO:curators]
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 HP:0002780 Bronchomalacia 
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 HP:0002797 Osteolysis 
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 HP:0003041 Radiohumeral synostosis "An abnormal osseous union (fusion) between the radius and the humerus." [HPO:curators]
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 HP:0003070 Elbow ankylosis 
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 HP:0003164 Hypothalamic gonadotropin-releasing hormone (GNRH) deficiency 
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 HP:0003187 Breast hypoplasia 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003228 Hypernatremia 
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 HP:0003312 Abnormal form of the vertebral bodies 
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 HP:0003470 Paralysis "Paralysis of voluntary muscles means loss of contraction due to interruption of one or more motor pathways from the brain to the muscle fibers. Although the word paralysis is often used interchangeably to mean either complete or partial loss of muscle strength, it is preferable to use paralysis or plegia for complete or severe loss of muscle strength, and paresis for partial or slight loss. Motor paralysis results from deficits of the upper motor neurons (corticospinal, corticobulbar, or subcorticospinal). Motor paralysis is often accompanied by an impairment in the facility of movement." [HPO:curators]
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 HP:0003510 Short stature, severe "A severe degree of short stature." [HPO:curators]
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 HP:0003552 Muscle stiffness 
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 HP:0003745 Sporadic 
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 HP:0003782 Eunuchoid habitus 
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 HP:0003795 Short middle phalanges (feet) 
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 HP:0003829 Incomplete penetrance 
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 HP:0004279 Hypoplastic hand 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004349 Reduced bone mineral density "A reduction of bone mineral density, that is, of the amount of matter per cubic centimeter of bones." [HPO:curators]
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 HP:0004374 Hemiplegia/hemiparesis "Loss of strength in the arm, leg, and sometimes face on one side of the body. Hemiplegia refers to a severe or complete loss of strength, whereas hemiparesis refers to a relatively mild loss of strength." [HPO:curators]
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 HP:0004409 Hyposmia "A decreased sensitivity to odorants (that is, a decreased ability to perceive odors)." [HPO:curators]
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 HP:0004440 Coronal craniosynostosis 
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 HP:0004493 Craniofacial hyperostosis "Hyperostosis refers to a localized bone overgrowth process (as opposed to sclerosis, which refers to a generalized disturbance with increased bone density). This term is used for excessive growth of the craniofacial bones." [HPO:curators]
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 HP:0004691 2-3 toe syndactyly "`Syndactyly` (HP:0001159) with fusion of toes two and three." [HPO:sdoelken]
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 HP:0004969 peripheral pulmonary artery stenosis 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005306 Capillary hemangiomas "The presence of a capillary hemangiomas, which are hemangiomas with small endothelial spaces." [HPO:curators]
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 HP:0005347 Cartilaginous trachea 
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 HP:0005466 Hypoplastic frontal bones 
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 HP:0005864 Pseudoarthrosis 
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 HP:0006009 Widened phalanges 
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 HP:0006101 Finger syndactyly "Webbing or fusion of the fingers, involving soft parts only or including bone structure. Bony fusions are revered to as "bony" Syndactyly if the fusion occurs in a radio-ulnar axis. Fusions of bones of the fingers in a proximo-distal axis are refered to as "Symphalangism"." [HPO:curators]
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 HP:0006110 Disproportionately short middle phalanges 
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 HP:0006283 Multiple unerupted teeth 
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 HP:0006487 Bowing of the long bones 
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 HP:0006501 Aplasia/Hypoplasia of the radius "A small/hypoplastic or absent/aplastic radius." [HPO:curators]
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 HP:0006610 Wide intermamillary distance 
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 HP:0006870 Lobar holoprosencephaly "A type of holoprosencephaly in which most of the right and left cerebral hemispheres and lateral ventricles are separated but the most rostral aspect of the telencephalon, the frontal lobes, are fused, especially ventrally." [gc:hpe]
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 HP:0007360 Aplasia/Hypoplasia of the cerebellum 
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 HP:0007370 Aplasia/Hypoplasia of the corpus callosum "Absence or underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0007546 Linear or reticular hyperpigmentation 
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 HP:0007676 Hypoplasia of the iris 
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 HP:0007957 Variable degree of corneal opacities 
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 HP:0008064 Ichthyosiform abnormality of the skin 
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 HP:0008080 Hallux varus "Medial deviation of the great toe owing to a deformity of the great toe joint causing the hallux to deviate medially." [HPO:curators]
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 HP:0008122 Tarsonavicular and calcaneonavicular fusion 
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 HP:0008187 Absence of secondary sex characteristics 
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 HP:0008197 Absence of pubertal development 
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 HP:0008213 Pituitary gonadotropin deficiency 
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 HP:0008230 Decreased testosterone in males 
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 HP:0008439 Lumbar hemivertebrae 
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 HP:0008527 Congenital sensorineural hearing loss 
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 HP:0008724 Hypoplastic ovary 
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 HP:0008734 Decreased testicular size 
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 HP:0008736 Hypoplasia of penis 
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 HP:0008905 Rhizomelic short stature 
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 HP:0009125 Lipodystrophy "Degenerative changes of the fat tissue." [HPO:curators]
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 HP:0009601 Aplasia/Hypoplasia of the thumb "Hypoplastic/small or absent thumb." [HPO:curators]
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 HP:0009800 maternal diabetes "Maternal diabetes can either be a gestational, mostly type 2 diabetes, or a type 1 diabetes. Essential is the resulting maternal hyperglycemia as a non-specific teratogen, imposing the same risk of congenital malformations to pregnant women with both type 1 and type2 diabetes." [HPO:curators]
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 HP:0009803 Hypoplastic/small phalanges of the hand 
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 HP:0009804 Reduced number of teeth 
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 HP:0009826 Hypoplasia involving bones of the extremities 
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 HP:0010049 Hypoplastic/short metacarpal bones 
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 HP:0010055 Broad hallux 
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 HP:0010059 Broad phalanges of the hallux 
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 HP:0010109 Hypoplastic/small hallux 
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 HP:0010529 Echolalia "The tendency to repeat vocalizations made by another person." [HPO:curators]
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 HP:0010550 Paraplegia "Severe or complete weakness of both lower extremities with sparing of the upper extremities." [HPO:curators]
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 HP:0010622 Neoplasia of the skeletal system "`Neoplasia` (HP:0002664) affecting the `skeleton` (FMA:23875)." [HPO:probinson]
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 HP:0010627 Hypoplasia of the pituitary gland "Underdevelopment of the pituitary gland." [HPO:curators]
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 HP:0010743 Hypoplasia of the metatarsal bones 
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 HP:0011304 Broad thumb "Increased thumb width without increased dorso-ventral dimension." [pmid:19125433]
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 HP:0011318 Bicoronal synostosis "Synostosis affecting the right and the left coronal suture." [DDD:awilkie]
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 HP:0011611 Interrupted aortic arch "Non-continuity of the aortic arch with an atretic point or absent segment." [DDD:dbrown]
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 HP:0011800 Midface retrusion "Posterior positions and/or vertical shortening of the infraorbital and perialar regions, or increased concavity of the face and/or reduced nasolabial angle." [DDD:jclayton-smith]
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 HP:0011849 Abnormal bone ossification "Any anomaly in the formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance." [HPO:probinson]
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 HP:0011961 Non-obstructive azoospermia "Absence of any measurable level of sperm in his semen, resulting from a defect in the production of spermatozoa in the testes. Can be differentiated from obstructive azoospermia on the basis of testicular biopsy." [HPO:probinson, pmid:20514278]
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 HP:0012032 Lipoma "Benign neoplasia derived from lipoblasts or lipocytes of white or brown fat. May be angiomatous or hibernomatous." [MPATH:417]
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 HP:0012062 Bone cyst "A fluid filled cavity that develops with a bone." [HPO:probinson]
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 HP:0012157 Subcortical cerebral atrophy "Atrophy of the cerebral subcortical white and gray matter, termed subcortical atrophy, reflects loss of nerve cells in the basal ganglia or fibers in the deep white matter." [HPO:probinson, pmid:20813998]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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 HP:0012385 Camptodactyly "The distal interphalangeal joint and/or the proximal interphalangeal joint of the fingers or toes cannot be extended to 180 degrees by either active or passive extension." [HPO:probinson]
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 HP:0030016 Dyspareunia "Recurrent or persistent genital pain associated with sexual intercourse." []
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 HP:0030019 Increased female libido "Elevated sexual desire in female" []
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 HP:0030084 Clinodactyly "An angulation of a digit at an interphalangeal joint in the plane of the palm (finger) or sole (toe)." [pmid:16252026]
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 HP:0030680 Abnormality of cardiovascular system morphology "Any structural anomaly of the heart and great vessels." []
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 HP:0040188 Osteochondrosis "Abnormal growth ossification centers in children. Initially a degeneration/ necrosis followed by regeneration or recalcification." []
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 HP:0100251 Lipomas of the central neryous system 
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 HP:0100257 Ectrodactyly "A condition in which middle parts of the hands and/or feet (digits and meta-carpals and -tarsals) are missing giving a cleft appearance. The severity is very variable ranging from slightly hypoplastic 3rd toe/fingers over absent 2nd or 3rd toes/fingers as far as oligo- or monodactyl hands and/or feet." [HPO:sdoelken]
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 HP:0100335 Non-midline cleft lip 
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 HP:0100639 Erectile abnormalities 
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 HP:0100702 Arachnoid cyst "Arachnoid cysts are filled with cerebrospinal fluid encased by arachnoidal cells." [HPO:sdoelken]
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 HP:0100761 Visceral angiomatosis 
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 HP:0100842 Septo-optic dysplasia "Underdevelopment of the optic nerve and absence of the septum pellucidum." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000100030 MAPK1 / P28482 / mitogen-activated protein kinase 1  / reaction
 ENSG00000124181 PLCG1 / P19174 / phospholipase C gamma 1  / reaction / complex
 ENSG00000126500 FLRT1 / Q9NZU1 / fibronectin leucine rich transmembrane protein 1  / complex / reaction
 ENSG00000118972 FGF23 / Q9GZV9 / fibroblast growth factor 23  / reaction / complex
 ENSG00000137218 FRS3 / O43559 / fibroblast growth factor receptor substrate 3  / complex / reaction
 ENSG00000109458 GAB1 / Q13480 / GRB2 associated binding protein 1  / reaction / complex
 ENSG00000121879 P42336 / PIK3CA / phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha  / reaction / complex
 ENSG00000102882 MAPK3 / P27361 / mitogen-activated protein kinase 3  / reaction
 ENSG00000177885 GRB2 / P62993 / growth factor receptor bound protein 2  / complex / reaction
 ENSG00000145675 P27986 / PIK3R1 / phosphoinositide-3-kinase regulatory subunit 1  / complex / reaction
 ENSG00000133116 KL / klotho / Q9UEF7  / complex / reaction
 ENSG00000166225 FRS2 / Q8WU20 / fibroblast growth factor receptor substrate 2  / reaction / complex
 ENSG00000011201 ANOS1 / P23352 / anosmin 1  / reaction / complex
 ENSG00000110395 CBL / P22681 / Cbl proto-oncogene  / reaction / complex
 ENSG00000174775 HRAS / P01112 / HRas proto-oncogene, GTPase  / reaction
 ENSG00000115904 SOS1 / Q07889 / SOS Ras/Rac guanine nucleotide exchange factor 1  / reaction / complex
 ENSG00000077782 FGFR1 / P11362 / fibroblast growth factor receptor 1  / reaction / complex
 ENSG00000147475 ERLIN2 / O94905 / ER lipid raft associated 2  / reaction
 ENSG00000160691 SHC1 / P29353 / SHC adaptor protein 1  / complex / reaction
 ENSG00000213281 NRAS / P01111 / NRAS proto-oncogene, GTPase  / reaction
 ENSG00000133703 KRAS / P01116 / KRAS proto-oncogene, GTPase  / reaction
 ENSG00000198910 L1CAM / P32004 / L1 cell adhesion molecule  / complex / reaction
 ENSG00000149294 NCAM1 / P13591 / neural cell adhesion molecule 1  / complex / reaction
 ENSG00000185070 FLRT2 / O43155 / fibronectin leucine rich transmembrane protein 2  / reaction / complex
 ENSG00000125848 FLRT3 / Q9NZU0 / fibronectin leucine rich transmembrane protein 3  / reaction / complex
 ENSG00000179295 PTPN11 / Q06124 / protein tyrosine phosphatase, non-receptor type 11  / complex / reaction






 

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© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr