ENSG00000122966


Homo sapiens

Features
Gene ID: ENSG00000122966
  
Biological name :CIT
  
Synonyms : CIT / citron rho-interacting serine/threonine kinase / O14578
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q24.23
Gene start: 119685790
Gene end: 119877291
  
Corresponding Affymetrix probe sets: 212801_at (Human Genome U133 Plus 2.0 Array)   242872_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000482318
Ensembl peptide - ENSP00000443199
Ensembl peptide - ENSP00000446105
Ensembl peptide - ENSP00000261833
Ensembl peptide - ENSP00000376305
Ensembl peptide - ENSP00000376306
NCBI entrez gene - 11113     See in Manteia.
OMIM - 605629
RefSeq - XM_017018739
RefSeq - XM_011537791
RefSeq - XM_011537792
RefSeq - XM_017018735
RefSeq - XM_017018736
RefSeq - XM_017018737
RefSeq - XM_017018738
RefSeq - NM_001206999
RefSeq - NM_007174
RefSeq - XM_006719206
RefSeq - XM_011537783
RefSeq - XM_011537784
RefSeq - XM_011537785
RefSeq - XM_011537787
RefSeq - XM_011537788
RefSeq - XM_011537789
RefSeq - XM_011537790
RefSeq Peptide - NP_001193928
RefSeq Peptide - NP_009105
swissprot - H0YGG8
swissprot - H7BYJ3
swissprot - O14578
swissprot - F5H4K4
Ensembl - ENSG00000122966
  
Related genetic diseases (OMIM): 617090 - Microcephaly 17, primary, autosomal recessive, 617090
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 citbENSDARG00000088825Danio rerio
 CITENSGALG00000007354Gallus gallus
 CitENSMUSG00000029516Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q5VT25 / CDC42BPA / CDC42 binding protein kinase alphaENSG0000014377622
Q9Y5S2 / CDC42BPB / CDC42 binding protein kinase betaENSG0000019875222
Q6DT37 / CDC42BPG / CDC42 binding protein kinase gammaENSG0000017121920
ROCK2 / O75116 / Rho associated coiled-coil containing protein kinase 2ENSG0000013431817
ROCK1 / Q13464 / Rho associated coiled-coil containing protein kinase 1ENSG0000006790017
DMPK / Q09013 / DM1 protein kinaseENSG0000010493610
LATS2 / Q9NRM7 / large tumor suppressor kinase 2ENSG000001504578
LATS1 / O95835 / large tumor suppressor kinase 1ENSG000001310238
Q9Y2H1 / STK38L / serine/threonine kinase 38 likeENSG000002114557
STK38 / Q15208 / serine/threonine kinase 38ENSG000001120797


Protein motifs (from Interpro)
Interpro ID Name
 IPR000719  Protein kinase domain
 IPR000961  AGC-kinase, C-terminal
 IPR001180  Citron homology (CNH) domain
 IPR001849  Pleckstrin homology domain
 IPR002219  Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
 IPR008271  Serine/threonine-protein kinase, active site
 IPR011009  Protein kinase-like domain superfamily
 IPR011993  PH-like domain superfamily
 IPR017405  Citron Rho-interacting kinase
 IPR017441  Protein kinase, ATP binding site
 IPR017892  Protein kinase, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000086 G2/M transition of mitotic cell cycle IEA
 biological_processGO:0000278 mitotic cell cycle ISS
 biological_processGO:0000281 mitotic cytokinesis IMP
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0007030 Golgi organization IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0008064 regulation of actin polymerization or depolymerization IEA
 biological_processGO:0016310 phosphorylation IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0032467 positive regulation of cytokinesis IMP
 biological_processGO:0035556 intracellular signal transduction IEA
 biological_processGO:0048699 generation of neurons ISS
 biological_processGO:0051301 cell division IEA
 biological_processGO:0051402 neuron apoptotic process IMP
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0030496 midbody IEA
 cellular_componentGO:0031985 Golgi cisterna IEA
 cellular_componentGO:0032154 cleavage furrow IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004674 protein serine/threonine kinase activity ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016301 kinase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0017048 Rho GTPase binding IEA
 molecular_functionGO:0017124 SH3 domain binding IEA
 molecular_functionGO:0030165 PDZ domain binding IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0097110 scaffold protein binding IDA


Pathways (from Reactome)
Pathway description
RHO GTPases activate CIT


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000076 Vesicoureteral reflux "Abnormal (retrograde) movement of urine from the bladder into ureters or kidneys related to inadequacy of the valvular mechanism at the ureterovesicular junction or other causes." [HPO:curators]
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 HP:0000104 Renal agenesis 
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 HP:0000122 Unilateral renal agenesis 
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 HP:0000219 Thin upper lip 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000340 Sloping forehead "A form of the forehead that slopes from top to bottom in an anterior direction." [HPO:curators]
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 HP:0000400 Large ears 
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 HP:0000414 Bulbous nose 
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 HP:0000582 Upslanting palpebral fissures 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001302 Pachygyria "A congenital abnormality of the cerebral hemisphere chacterized by unusually thick gyrations (convolutions) of the cerebral cortex." [HPO:curators]
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 HP:0001321 Cerebellar hypoplasia 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0002119 Ventriculomegaly 
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 HP:0002282 Heterotopia 
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 HP:0002365 Hypoplasia of the brainstem 
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 HP:0003103 Abnormality of cortical bone "An abnormality of cortical bone (also known as compact bone), which forms the dense surface of bones." [HPO:curators]
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 HP:0003577 Onset at birth 
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 HP:0003828 Variable expressivity 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0007333 Hypoplastic frontal lobes "Underdevelopment of the frontal lobe of the cerebrum." [HPO:sdoelken]
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 HP:0009879 Cortical gyral simplification "An abnormal reduction of the number and complexity of the pattern of gyrations of the cerebral cortex." [HPO:curators]
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0012471 Thick vermilion border "Increased width of the "skin of vermilion border region of upper lip" (FMA:312645)." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000111276 CDKN1B / P46527 / cyclin dependent kinase inhibitor 1B  / complex / reaction
 ENSG00000105357 MYH14 / Q7Z406 / myosin heavy chain 14  / reaction
 ENSG00000136238 RAC1 / P63000 / Rac family small GTPase 1  / complex / reaction
 ENSG00000101335 MYL9 / P24844 / myosin light chain 9  / reaction
 ENSG00000155366 RHOC / P08134 / ras homolog family member C  / complex / reaction
 ENSG00000133026 MYH10 / P35580 / myosin heavy chain 10  / reaction
 ENSG00000118680 MYL12B / O14950 / myosin light chain 12B  / reaction
 ENSG00000133392 MYH11 / P35749 / myosin heavy chain 11  / reaction
 ENSG00000067560 RHOA / P61586 / ras homolog family member A  / complex / reaction
 ENSG00000122966 CIT / O14578 / citron rho-interacting serine/threonine kinase  / complex
 ENSG00000100345 MYH9 / P35579 / myosin heavy chain 9  / reaction
 ENSG00000118193 KIF14 / Q15058 / kinesin family member 14  / complex / reaction
 ENSG00000092841 MYL6 / P60660 / myosin light chain 6  / reaction
 ENSG00000143878 RHOB / P62745 / ras homolog family member B  / reaction / complex
 ENSG00000132535 DLG4 / P78352 / discs large MAGUK scaffold protein 4  / reaction / complex
 ENSG00000198901 PRC1 / O43663 / protein regulator of cytokinesis 1  / complex / reaction






 

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